RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ABLIM3O94929 683 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 VNN1O95497 513 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 NUDT7P0C024 238 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 BMP1P13497 986 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 KRT13P13646 458 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 MYL6P60660 151 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 MYO1EQ12965 1108 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 BIRC3Q13489 604 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 PTCRAQ6ISU1 281 aaPredicted RBP12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 C12orf76Q8N812 135 aaPredicted RBP12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 MLKLQ8NB16 471 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 ZNF461Q8TAF7 563 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 APOL5Q9BWW9 433 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 XYLT2Q9H1B5 865 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 CDH22Q9UJ99 828 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 FBXW11Q9UKB1 542 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 DSEQ9UL01 958 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 L1RE1Q9UN81 338 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 PHACTR2O75167 634 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 OR4Q2P0C623 313 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 IL9P15248 144 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 GCLMP48507 274 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 ARPP19P56211 112 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 NLRP12P59046 1061 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 SMAD4Q13485 552 aaKnown RBP12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 TRPC3Q13507 836 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 NCOA4Q13772 614 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 SOWAHAQ2M3V2 549 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 PUS10Q3MIT2 529 aaKnown RBP12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 TJAP1Q5JTD0 557 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 LIMS2Q7Z4I7 341 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 TOP6BLQ8N6T0 577 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 KREMEN2Q8NCW0 462 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 OR10T2Q8NGX3 314 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 HDAC7Q8WUI4 952 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 TMEM209Q96SK2 561 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 ADAM7Q9H2U9 754 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 PLEKHA4Q9H4M7 779 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 SFXN1Q9H9B4 322 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 RWDD2AQ9UIY3 292 aa12.16□□□□□ -0.46
CCL3L3-201ENST00000612839 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 HUS1O60921 280 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 RFPL2O75678 378 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 PAPLNO95428 1278 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 CPB1P15086 417 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 ATF2P15336 505 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 ATICP31939 592 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 ITIH3Q06033 890 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 WDR72Q3MJ13 1102 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 DPH6Q7L8W6 267 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 TMEM86AQ8N2M4 240 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 SUSD6Q92537 303 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 ELMO3Q96BJ8 720 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
CCL3L3-201ENST00000612839 CCDC195A0A1B0GUA6 201 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 GABRDO14764 452 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ZMYND10O75800 440 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 VNN2O95498 520 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 C8AP07357 584 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 WEE2P0C1S8 567 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 GTF2H1P32780 548 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 GPR17Q13304 367 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ZNF699Q32M78 642 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 DCAF17Q5H9S7 520 aaPredicted RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 TPGS2Q68CL5 300 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 KRT39Q6A163 491 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 GPR149Q86SP6 731 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 OSTM1Q86WC4 334 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 THEM5Q8N1Q8 247 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CMASQ8NFW8 434 aaPredicted RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 TAS1R2Q8TE23 839 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 KBTBD7Q8WVZ9 684 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SLC35C1Q96A29 364 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ZCWPW1Q9H0M4 648 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms