RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MTCL1Q9Y4B5 1905 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 A0A1W2PQJ5 194 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 ARHGEF37A1IGU5 675 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 PER2O15055 1255 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 TNNC2P02585 160 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 PSMC2P35998 433 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 PNPLA4P41247 253 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 BRCC3P46736 316 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 AARSP49588 968 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 CASP4P49662 377 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 TAF6P49848 677 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 AP3M2P53677 418 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 LILRA4P59901 499 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 GNG11P61952 73 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 MEA1Q16626 185 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 INTS8Q75QN2 995 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 RBM23Q86U06 439 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 CREBRFQ8IUR6 639 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 EFHBQ8N7U6 833 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 C1orf127Q8N9H9 656 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 APPL2Q8NEU8 664 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 OR8K1Q8NGG5 319 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 PARD3BQ8TEW8 1205 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 AUTS2Q8WXX7 1259 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 HLA-CQ95604 372 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 CCDC127Q96BQ5 260 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 ZNF560Q96MR9 790 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 KLHL5Q96PQ7 755 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 WDR24Q96S15 920 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 IGFLR1Q9H665 355 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 FNIP2Q9P278 1114 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 ITGA11Q9UKX5 1188 aa9.48□□□□□ -0.89
SMAD4-217ENST00000611848 LUC7L2Q9Y383 392 aaKnown RBP9.48□□□□□ -0.89
SMAD4-217ENST00000611848 COL6A3P12111 3177 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 M0QZQ0 153 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 C2CD2LO14523 706 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 AKAP3O75969 853 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 C1RP00736 705 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 ADH1AP07327 375 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 CNPP09543 421 aaKnown RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 SRGAP2BP0DMP2 458 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 IGFBP6P24592 240 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 CASQ1P31415 396 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 MTIF2P46199 727 aaKnown RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 CLDN10P78369 228 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 RBP5P82980 135 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 ADAM15Q13444 863 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 NAA30Q147X3 362 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 VWA3BQ502W6 1294 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 RTP2Q5QGT7 225 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 DSTYKQ6XUX3 929 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 TMEM184AQ6ZMB5 413 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 ANKS3Q6ZW76 656 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 ZC3H3Q8IXZ2 948 aaKnown RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 PDCL2Q8N4E4 241 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 LRRC52Q8N7C0 313 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 OR5B17Q8NGF7 314 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 LNX1Q8TBB1 728 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-217ENST00000611848 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 CLDND1Q9NY35 253 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
SMAD4-217ENST00000611848 H7C4K7 107 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 I3L4J1 428 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 PPEF2O14830 753 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 SLC16A3O15427 465 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 TEX28O15482 410 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 CLASP2O75122 1294 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 ITGB3P05106 788 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 KRT19P08727 400 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 KRT13P13646 458 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 TYMPP19971 482 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 KLRC2P26717 231 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 NDUFV1P49821 464 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 VAMP7P51809 220 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 ZBED6P86452 979 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 CDK17Q00537 523 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 KCNC3Q14003 757 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 PSMD5Q16401 504 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 SV2CQ496J9 727 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 WDR59Q6PJI9 974 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 TRAPPC11Q7Z392 1133 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 TMEM130Q8N3G9 435 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 CXorf38Q8TB03 319 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms