RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TMEM191CA6NGB0 347 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 MEFVO15553 781 aaPredicted RBP14.44□□□□□ -0.1
NEK3-205ENST00000610828 EIF4BP23588 611 aaKnown RBP14.44□□□□□ -0.1
NEK3-205ENST00000610828 IRAK1P51617 712 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 SKOR1P84550 965 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 ORC1Q13415 861 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 GRB14Q14449 540 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 CYP4A22Q5TCH4 519 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 RUFY4Q6ZNE9 571 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 IFNLR1Q8IU57 520 aaPredicted RBP14.44□□□□□ -0.1
NEK3-205ENST00000610828 KATNAL2Q8IYT4 538 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 WDTC1Q8N5D0 677 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 GBA2Q9HCG7 927 aaPredicted RBP14.44□□□□□ -0.1
NEK3-205ENST00000610828 KLHL11Q9NVR0 708 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 PCDHGC3Q9UN70 934 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 ZSWIM8A7E2V4 1837 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 HPDP32754 393 aaPredicted RBP14.44□□□□□ -0.1
NEK3-205ENST00000610828 MAN1A1P33908 653 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 CALCOCO2Q13137 446 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 GRIK4Q16099 956 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 DUSP28Q4G0W2 176 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 KDM7AQ6ZMT4 941 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 OR6J1Q8NGC5 347 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 CCDC114Q96M63 670 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 TINF2Q9BSI4 451 aa14.44□□□□□ -0.1
NEK3-205ENST00000610828 IVLP07476 585 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 MMP3P08254 477 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 TCF4P15884 667 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 PDCLQ13371 301 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 ACVR2BQ13705 512 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 KRT71Q3SY84 523 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 SPDYCQ5MJ68 293 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 SLCO2A1Q92959 643 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
NEK3-205ENST00000610828 PARK7Q99497 189 aaKnown RBP14.43□□□□□ -0.1
NEK3-205ENST00000610828 FAM118BQ9BPY3 351 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 BCO2Q9BYV7 579 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 OSBPL8Q9BZF1 889 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 DCLK3Q9C098 648 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 PABPC3Q9H361 631 aaKnown RBP14.43□□□□□ -0.1
NEK3-205ENST00000610828 ABHD16BQ9H3Z7 469 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 SMYD3Q9H7B4 428 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 CWC15Q9P013 229 aaKnown RBP14.43□□□□□ -0.1
NEK3-205ENST00000610828 ASIC3Q9UHC3 531 aa14.43□□□□□ -0.1
NEK3-205ENST00000610828 R3HDM2Q9Y2K5 976 aaKnown RBP14.43□□□□□ -0.1
NEK3-205ENST00000610828 F8VP50 259 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 TSPAN1O60635 241 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 CDH5P33151 784 aaPredicted RBP14.42□□□□□ -0.1
NEK3-205ENST00000610828 ZNF252P-AS1Q0IIN9 211 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 KLF1Q13351 362 aaPredicted RBP14.42□□□□□ -0.1
NEK3-205ENST00000610828 DGKDQ16760 1214 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 SLC10A6Q3KNW5 377 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 ATP13A4Q4VNC1 1196 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 DENND1BQ6P3S1 775 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 FOXR1Q6PIV2 292 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 PLEKHH3Q7Z736 793 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 EXD1Q8NHP7 514 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 ART4Q93070 314 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 PTPN18Q99952 460 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 SDCBP2Q9H190 292 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 ASB7Q9H672 318 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 GINS2Q9Y248 185 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 CENPFP49454 3210 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 TCRBV5S1A1TA0A578 114 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 MED7O43513 233 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 FGFR4P22455 802 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 RAD23BP54727 409 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 TMEM132DQ14C87 1099 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 TRIP13Q15645 432 aaPredicted RBP14.42□□□□□ -0.1
NEK3-205ENST00000610828 FAM110CQ1W6H9 321 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 DENND2CQ68D51 928 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 KIAA0319LQ8IZA0 1049 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 C3orf20Q8ND61 904 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 GRK7Q8WTQ7 553 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 ADPGKQ9BRR6 497 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 EPB41L4BQ9H329 900 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 RABEP2Q9H5N1 569 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 GRIN2DO15399 1336 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 KAT6AQ92794 2004 aa14.42□□□□□ -0.1
NEK3-205ENST00000610828 GOLGA8SH3BPF8 625 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 EIF3HO15372 352 aaKnown RBP eCLIP14.41□□□□□ -0.1
NEK3-205ENST00000610828 ADCY6O43306 1168 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 CELF2O95319 508 aaKnown RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 GAS8O95995 478 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 POLR2BP30876 1174 aaKnown RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 CETN2P41208 172 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 EIF3BP55884 814 aaKnown RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 GUCY1A3Q02108 690 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 OGDHQ02218 1023 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 TMEM62Q0P6H9 643 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 PTPN20Q4JDL3 420 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 ODF2Q5BJF6 829 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 SPRYD7Q5W111 196 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 ANKS1BQ7Z6G8 1248 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 CCDC25Q86WR0 208 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 C2orf69Q8N8R5 385 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 NPLOC4Q8TAT6 608 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms