RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 CYB561D2O14569 222 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 ZNF263O14978 683 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 CLSTN1O94985 981 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 EFEMP2O95967 443 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 CD58P19256 250 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 IGFBP6P24592 240 aaPredicted RBP17.6■□□□□ 0.41
PMF1-206ENST00000606952 GNA15P30679 374 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 USP8P40818 1118 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 NDST1P52848 882 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
PMF1-206ENST00000606952 C10orf76Q5T2E6 689 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 TOGARAM2Q6ZUX3 1019 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 ADGRF2Q8IZF7 708 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 PHOSPHO2Q8TCD6 241 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 SLC20A1Q8WUM9 679 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 FAM193BQ96PV7 902 aaPredicted RBP17.6■□□□□ 0.41
PMF1-206ENST00000606952 TWNKQ96RR1 684 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.6■□□□□ 0.417e-8■■□□□ 13.2
PMF1-206ENST00000606952 NT5C1AQ9BXI3 368 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 DEF6Q9H4E7 631 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 MARCH5Q9NX47 278 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 HMGXB4Q9UGU5 601 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 NAGPAQ9UK23 515 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 DSEQ9UL01 958 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
PMF1-206ENST00000606952 REXO2Q9Y3B8 237 aaKnown RBP17.6■□□□□ 0.41
PMF1-206ENST00000606952 A0A087X0T9 212 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 AKR1B10O60218 316 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 FAM228BP0C875 321 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 GZMAP12544 262 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 SLC11A1P49279 550 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 KRT83P78385 493 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 TRIM72Q6ZMU5 477 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 OTOP2Q7RTS6 562 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 CRYBG2Q8N1P7 616 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 DPF3Q92784 378 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 ACP6Q9NPH0 428 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
PMF1-206ENST00000606952 NRP1O14786 923 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 SYN3O14994 580 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 CCP110O43303 1012 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 CAPN15O75808 1086 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 GJB5O95377 273 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 CYP1A1P04798 512 aaPredicted RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 ITGB1P05556 798 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 GALTP07902 379 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 CCDC175P0C221 793 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 VDRP11473 427 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 ODC1P11926 461 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 CDH5P33151 784 aaPredicted RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 OR1G1P47890 313 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 LHX1P48742 406 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 DSTYKQ6XUX3 929 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 OSTM1Q86WC4 334 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 GPIHBP1Q8IV16 184 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 GLYCTKQ8IVS8 523 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 CCAR2Q8N163 923 aaKnown RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 SP7Q8TDD2 431 aaPredicted RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 ZNF606Q8WXB4 792 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 ZSWIM1Q9BR11 485 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 COLEC11Q9BWP8 271 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 SPTLC3Q9NUV7 552 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 ADAM28Q9UKQ2 775 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 INTUQ9ULD6 942 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 ZMYND8Q9ULU4 1186 aaPredicted RBP17.58■□□□□ 0.4
PMF1-206ENST00000606952 PPP2R2CQ9Y2T4 447 aa17.58■□□□□ 0.4
PMF1-206ENST00000606952 PJA2O43164 708 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 IPO7O95373 1038 aaKnown RBP17.57■□□□□ 0.4
PMF1-206ENST00000606952 LSM8O95777 96 aaKnown RBP17.57■□□□□ 0.4
PMF1-206ENST00000606952 ALDH2P05091 517 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 MMEP08473 750 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 SYN1P17600 705 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 TNFAIP3P21580 790 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 BRCC3P46736 316 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 ELAVL2Q12926 359 aaKnown RBP17.57■□□□□ 0.4
PMF1-206ENST00000606952 STILQ15468 1287 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 WSCD1Q658N2 575 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 ARHGAP17Q68EM7 881 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 ALKBH5Q6P6C2 394 aaKnown RBP17.57■□□□□ 0.4
PMF1-206ENST00000606952 ACRBPQ8NEB7 543 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 TFAP2BQ92481 460 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 PCDHB18PQ96TA0 734 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 DNAI2Q9GZS0 605 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 ISCUQ9H1K1 167 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 MTIF3Q9H2K0 278 aaKnown RBP17.57■□□□□ 0.4
PMF1-206ENST00000606952 FAN1Q9Y2M0 1017 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 PTPRDP23468 1912 aa17.57■□□□□ 0.4
PMF1-206ENST00000606952 F8W810 466 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 O00370 1275 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms