RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CALM2P0DP24 149 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CALM3P0DP25 149 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 RARBP10826 455 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 KRT4P19013 534 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCNA2P20248 432 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 LONP1P36776 959 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ARHGAP8P85298 464 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SPAG1Q07617 926 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ACTN3Q08043 901 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 KLHL38Q2WGJ6 581 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SPDYAQ5MJ70 313 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 GPR139Q6DWJ6 353 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SEZ6L2Q6UXD5 910 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CTAGE6Q86UF2 777 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CTAGE4Q8IX94 777 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 DQX1Q8TE96 717 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 TSPEARQ8WU66 669 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 WDR60Q8WVS4 1066 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 GRAMD1AQ96CP6 724 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 METTL2AQ96IZ6 378 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ADAD1Q96M93 576 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CDK5RAP1Q96SZ6 601 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 TDRD1Q9BXT4 1180 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 FRMD8P1Q9BZ68 369 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 NUF2Q9BZD4 464 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZSWIM5Q9P217 1185 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 RABGEF1Q9UJ41 708 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 C19orf53Q9UNZ5 99 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCDC162PA2VCL2 907 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 GABRDO14764 452 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 DOK2O60496 412 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ATP9AO75110 1047 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 HSMCR30P0CW71 290 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ARF4P18085 180 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 OSBPP22059 807 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 MAPK3P27361 379 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 CACNB3P54284 484 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 FMR1Q06787 632 aaKnown RBP eCLIP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SLC14A1Q13336 389 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 EFTUD2Q15029 972 aaKnown RBP eCLIP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 TCTE1Q5JU00 501 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ATL3Q6DD88 541 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRIG3Q6UXM1 1119 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 KDM7AQ6ZMT4 941 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 VASH1Q7L8A9 365 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 AVL9Q8NBF6 648 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 C3orf58Q8NDZ4 430 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 EXT2Q93063 718 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 AKT1S1Q96B36 256 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 UBXN6Q9BZV1 441 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 TM9SF3Q9HD45 589 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 HMG20BQ9P0W2 317 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 LARSQ9P2J5 1176 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 SAP30BPQ9UHR5 308 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 FAM32AQ9Y421 112 aaKnown RBP6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 NDUFB9Q9Y6M9 179 aa6.15□□□□□ -1.42
COL4A3BP-207ENST00000604926 TNKSO95271 1327 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 FRMPD2Q68DX3 1309 aaPredicted RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 C1orf232A0A0U1RR37 186 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 LRRD1A4D1F6 860 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 FZD6O60353 706 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 URI1O94763 535 aaPredicted RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 CPB1P15086 417 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 CCR1P32246 355 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 GRIK1P39086 918 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 ALDH5A1P51649 535 aaPredicted RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 TBL3Q12788 808 aaKnown RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 SQLEQ14534 574 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 EFHC1Q5JVL4 640 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZBTB41Q5SVQ8 909 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 TRIM65Q6PJ69 517 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZNF852Q6ZMS4 543 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 AFAP1L2Q8N4X5 818 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZNF579Q8NAF0 562 aaKnown RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 OR6S1Q8NH40 331 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 ZUFSPQ96AP4 578 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 CAMK1GQ96NX5 476 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 BTBD2Q9BX70 525 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 SHCBP1LQ9BZQ2 653 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 FBRSQ9HAH7 460 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 OSGEPQ9NPF4 335 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 PRDM11Q9NQV5 511 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 PLSCR4Q9NRQ2 329 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 USP40Q9NVE5 1235 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 MRPL39Q9NYK5 338 aaKnown RBP6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 TBC1D29Q9UFV1 150 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 SALL4Q9UJQ4 1053 aa6.15□□□□□ -1.43
COL4A3BP-207ENST00000604926 SENP3-EIF4A1A0A087X0R7 540 aa6.14□□□□□ -1.43
COL4A3BP-207ENST00000604926 RNF40O75150 1001 aa6.14□□□□□ -1.43
COL4A3BP-207ENST00000604926 PLGP00747 810 aaPredicted RBP6.14□□□□□ -1.43
COL4A3BP-207ENST00000604926 TBXAS1P24557 533 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms