RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 VRTNQ9H8Y1 702 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 ABT1Q9ULW3 272 aaKnown RBP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 TCRBV5S1A1TA0A578 114 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 TCF4P15884 667 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 ATICP31939 592 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 CDH5P33151 784 aaPredicted RBP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 GGCXP38435 758 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 TAS2R40P59535 323 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 FAM193AP78312 1265 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 CAP1Q01518 475 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 HLTFQ14527 1009 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 SNX17Q15036 470 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 NOTUMQ6P988 496 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 SNX27Q96L92 541 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 MRPL47Q9HD33 250 aaKnown RBP11.51□□□□□ -0.57
LINC01235-201ENST00000604724 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
LINC01235-201ENST00000604724 PHF2O75151 1096 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
LINC01235-201ENST00000604724 RARAP10276 462 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 AKR1A1P14550 325 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 AKAP5P24588 427 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 YWHAEP62258 255 aaKnown RBP11.5□□□□□ -0.57
LINC01235-201ENST00000604724 DR1Q01658 176 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 OGDHQ02218 1023 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 SREBF2Q12772 1141 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 GPS2Q13227 327 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 CCDC26Q8TAB7 109 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 FEZF2Q8TBJ5 459 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 TRIB2Q92519 343 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 C18orf25Q96B23 403 aaPredicted RBP11.5□□□□□ -0.57
LINC01235-201ENST00000604724 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 APOL6Q9BWW8 343 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 DPH5Q9H2P9 285 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 PIN4Q9Y237 131 aaKnown RBP11.5□□□□□ -0.57
LINC01235-201ENST00000604724 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 Q9Y3F1 56 aa11.5□□□□□ -0.57
LINC01235-201ENST00000604724 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 RECQL4O94761 1208 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 CALB1P05937 261 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 SLC1A1P43005 524 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
LINC01235-201ENST00000604724 TERF2Q15554 542 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 SEC14L1Q92503 715 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 GOLGA6BA6NDN3 693 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 TMEM191CA6NGB0 347 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 CA12O43570 354 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PGK1P00558 417 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PAEPP09466 180 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 HOXC8P31273 242 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 GJC1P36383 396 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 FLT3P36888 993 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PSMC4P43686 418 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 RBP5P82980 135 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 CDC42EP1Q00587 391 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 GABPB1Q06547 395 aaPredicted RBP11.49□□□□□ -0.57
LINC01235-201ENST00000604724 TRIM32Q13049 653 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 CUL1Q13616 776 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 DNAJC24Q6P3W2 148 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 ANKS1BQ7Z6G8 1248 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 C7orf31Q8N865 590 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
LINC01235-201ENST00000604724 MAGOHBQ96A72 148 aaKnown RBP11.49□□□□□ -0.57
LINC01235-201ENST00000604724 TMEM176AQ96HP8 235 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 CPXM1Q96SM3 734 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 VPS18Q9P253 973 aa11.49□□□□□ -0.57
LINC01235-201ENST00000604724 F8VP50 259 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 CYBAP13498 195 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 PTGIRP43119 386 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 KCNJ1P48048 391 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 TM4SF4P48230 202 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 NDST1P52848 882 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 INCA1Q0VD86 236 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 NNTQ13423 1086 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 CLUL1Q15846 466 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 ZBTB6Q15916 424 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 CYP4F22Q6NT55 531 aa11.48□□□□□ -0.57
LINC01235-201ENST00000604724 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms