RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 LNP1A1A4G5 178 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 PCNX2A6NKB5 2137 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 SRRM3A6NNA2 597 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-211ENST00000601614 RNF40O75150 1001 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 LARGE1O95461 756 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 ALDH1A3P47895 512 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 PLCB2Q00722 1185 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 TRIM68Q6AZZ1 485 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 RIN3Q8TB24 985 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 WASF1Q92558 559 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 LPIN3Q9BQK8 851 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 FAM83CQ9BQN1 747 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 GKN1Q9NS71 199 aa17.46■□□□□ 0.39
SSBP4-211ENST00000601614 SCN1AP35498 2009 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 BCLAF3A2AJT9 711 aaKnown RBP17.45■□□□□ 0.38
SSBP4-211ENST00000601614 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
SSBP4-211ENST00000601614 CAVIN2O95810 425 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 WEE1P30291 646 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 MCM2P49736 904 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 GUCY2FP51841 1108 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 CREB5Q02930 508 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 MAPK7Q13164 816 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 CAMKK1Q8N5S9 505 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 TCHPQ9BT92 498 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 SLC46A2Q9BY10 475 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 HAPLN2Q9GZV7 340 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 EBF3Q9H4W6 596 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 TASP1Q9H6P5 420 aa17.45■□□□□ 0.38
SSBP4-211ENST00000601614 ANKRD11Q6UB99 2663 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-211ENST00000601614 TNRC6BQ9UPQ9 1833 aaKnown RBP17.44■□□□□ 0.38
SSBP4-211ENST00000601614 CACNA1EQ15878 2313 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 PPEF2O14830 753 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 CXCL8P10145 99 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 ATF6P18850 670 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
SSBP4-211ENST00000601614 LRPAP1P30533 357 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 GRSF1Q12849 480 aaKnown RBP eCLIP17.44■□□□□ 0.38
SSBP4-211ENST00000601614 RUNX3Q13761 415 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 ZBTB6Q15916 424 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 NSUN7Q8NE18 718 aaKnown RBP17.44■□□□□ 0.38
SSBP4-211ENST00000601614 ERMNQ8TAM6 284 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 EZH1Q92800 747 aaPredicted RBP17.44■□□□□ 0.38
SSBP4-211ENST00000601614 SCNM1Q9BWG6 230 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 CCL26Q9Y258 94 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 TCHHQ07283 1943 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 PI4KAP42356 2102 aa17.44■□□□□ 0.38
SSBP4-211ENST00000601614 OR6C75A6NL08 312 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 PATE3B3GLJ2 98 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 CDX4O14627 284 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-211ENST00000601614 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
SSBP4-211ENST00000601614 JAK2O60674 1132 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 ATG13O75143 517 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 HIP1RO75146 1068 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 OR52Z1P0C646 297 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 ARSAP15289 507 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 MUTP22033 750 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
SSBP4-211ENST00000601614 RING1Q06587 406 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 ZNF174Q15697 407 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 ARHGAP15Q53QZ3 475 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 OR10T2Q8NGX3 314 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 KMT5AQ9NQR1 393 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 ANKFY1Q9P2R3 1169 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 KIAA1024Q9UPX6 916 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 INVSQ9Y283 1065 aa17.43■□□□□ 0.38
SSBP4-211ENST00000601614 E9PMD0 336 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 SLC16A4O15374 487 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 GALK1P51570 392 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-211ENST00000601614 MYBPC2Q14324 1141 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSBP4-211ENST00000601614 ME3Q16798 604 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 OVOS1Q6IE37 1185 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 USP37Q86T82 979 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 TMEM150AQ86TG1 271 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
SSBP4-211ENST00000601614 OXCT2Q9BYC2 517 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-211ENST00000601614 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
SSBP4-211ENST00000601614 GON4LQ3T8J9 2241 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 TMEM8BA6NDV4 472 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 TOM1L1O75674 476 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 FGF19O95750 216 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 NMT1P30419 496 aaKnown RBP17.41■□□□□ 0.38
SSBP4-211ENST00000601614 TNFSF9P41273 254 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 ELF2Q15723 593 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 DAB2IPQ5VWQ8 1189 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 HAUS3Q68CZ6 603 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 LRSAM1Q6UWE0 723 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 DSTYKQ6XUX3 929 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 RPLP0P6Q8NHW5 317 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 USP13Q92995 863 aaPredicted RBP17.41■□□□□ 0.38
SSBP4-211ENST00000601614 KIF12Q96FN5 646 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 SEPT5Q99719 369 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms