RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 ALDH1A3P47895 512 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 EPHB3P54753 998 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 MYL7Q01449 175 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 SIGLEC14Q08ET2 396 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 MGAT5BQ3V5L5 792 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 CYP4A22Q5TCH4 519 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 PDZD4Q76G19 769 aaPredicted RBP17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 TRAPPC11Q7Z392 1133 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 DCP1BQ8IZD4 617 aaKnown RBP17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 ADGRF2Q8IZF7 708 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 ATAD1Q8NBU5 361 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 ST13P5Q8NFI4 369 aaPredicted RBP17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 SMARCE1Q969G3 411 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 MMS19Q96T76 1030 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 KCTD10Q9H3F6 313 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 SMOC2Q9H3U7 446 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 KCNK12Q9HB15 430 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 DDX43Q9NXZ2 648 aaKnown RBP17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 EPS15L1Q9UBC2 864 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 CDH7Q9ULB5 785 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 SLC27A5Q9Y2P5 690 aa17.06■□□□□ 0.32
PPFIA4-213ENST00000601609 MYL4P12829 197 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 LAMP2P13473 410 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 COL9A1P20849 921 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 NR2F2P24468 414 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 CASP4P49662 377 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 TNNC1P63316 161 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 TDGQ13569 410 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 SCARA3Q6AZY7 606 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 SMYD4Q8IYR2 804 aaPredicted RBP17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 TMEM86AQ8N2M4 240 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 TOP6BLQ8N6T0 577 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 ITFG1Q8TB96 612 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 RSAD2Q8WXG1 361 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 FGF13Q92913 245 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 BORCS6Q96GS4 357 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 ABI2Q9NYB9 513 aaPredicted RBP17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 ZFP37Q9Y6Q3 630 aaPredicted RBP17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 MUC3AQ02505 3323 aa17.05■□□□□ 0.32
PPFIA4-213ENST00000601609 SOAT2O75908 522 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 ACAT1P24752 427 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 VEPH1Q14D04 833 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 TAF12Q16514 161 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 CENPPQ6IPU0 288 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 SLC9A9Q8IVB4 645 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 GUF1Q8N442 669 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 PBXIP1Q96AQ6 731 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 MFSD14AQ96MC6 490 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 RTP3Q9BQQ7 232 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 CRISPLD1Q9H336 500 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 FBXL21Q9UKT6 434 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 HCN4Q9Y3Q4 1203 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 DOCK6Q96HP0 2047 aa17.04■□□□□ 0.32
PPFIA4-213ENST00000601609 LRRIQ3A6PVS8 624 aaPredicted RBP17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 ZNF197O14709 1029 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 KRT13P13646 458 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 CEBPBP17676 345 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 RPL13P26373 211 aaKnown RBP17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 HFE2Q6ZVN8 426 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 MTSS1LQ765P7 747 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 SUGP1Q8IWZ8 645 aaKnown RBP17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 HS6ST3Q8IZP7 471 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 TTC9BQ8N6N2 239 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 CXorf38Q8TB03 319 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 SPPL2BQ8TCT7 592 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 MCRS1Q96EZ8 462 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 TIGD1Q96MW7 591 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 TSG101Q99816 390 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 DMAC2Q9NW81 257 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 CEP72Q9P209 647 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 NUMBLQ9Y6R0 609 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
PPFIA4-213ENST00000601609 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 VNN2O95498 520 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 PCSK1P29120 753 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 LHX1P48742 406 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 TUFMP49411 452 aaKnown RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 AP3M2P53677 418 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 SMARCB1Q12824 385 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 INTS6LQ5JSJ4 861 aaKnown RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 ITIH5Q86UX2 942 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 OSTM1Q86WC4 334 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 NPAS3Q8IXF0 933 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 LEMD2Q8NC56 503 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms