RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	SOAT2	O75908	522 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	ITGB3	P05106	788 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	HSP90AA1	P07900	732 aa	Known RBP	13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	GLUL	P15104	373 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	GJA1	P17302	382 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	POLR2B	P30876	1174 aa	Known RBP	13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	AMPD3	Q01432	767 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	BMT2	Q1RMZ1	405 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	FAM78A	Q5JUQ0	283 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	ARMCX5	Q6P1M9	558 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	LIMS2	Q7Z4I7	341 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	CBWD2	Q8IUF1	395 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	GRAMD1C	Q8IYS0	662 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	SYCP3	Q8IZU3	236 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	OR5B17	Q8NGF7	314 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	SHKBP1	Q8TBC3	707 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	LEO1	Q8WVC0	666 aa	Predicted RBP	13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	ASB16	Q96NS5	453 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	PKMYT1	Q99640	499 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	PYM1	Q9BRP8	204 aa	Known RBP	13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	LRRC27	Q9C0I9	530 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	MFSD1	Q9H3U5	465 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	TBC1D17	Q9HA65	648 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	ARHGEF3	Q9NR81	526 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	AGPAT3	Q9NRZ7	376 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	TMLHE	Q9NVH6	421 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	FAM86C1	Q9NVL1	165 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	INTS13	Q9NVM9	706 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	HSPBP1	Q9NZL4	362 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	HPSE	Q9Y251	543 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	PTPRD	P23468	1912 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	GREB1	Q4ZG55	1949 aa		13.78	□□□□□ -0.2
FKRP-223	ENST00000600872	FAM237A	A0A1B0GTK4	181 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	KIAA0391	O15091	583 aa	Known RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	ATF6	P18850	670 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	ME1	P48163	572 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	CDR1	P51861	262 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	TFAM	Q00059	246 aa	Known RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	GAREM2	Q75VX8	874 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	TICRR	Q7Z2Z1	1910 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	CCDC105	Q8IYK2	499 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	PDCL2	Q8N4E4	241 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	ELSPBP1	Q96BH3	223 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF512	Q96ME7	567 aa	Predicted RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	MTMR12	Q9C0I1	747 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	TRPV4	Q9HBA0	871 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	GDAP2	Q9NXN4	497 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	SERTAD1	Q9UHV2	236 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	DSE	Q9UL01	958 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	CFAP45	Q9UL16	551 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	L1RE1	Q9UN81	338 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	AGAP1	Q9UPQ3	857 aa		13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.77	□□□□□ -0.21
FKRP-223	ENST00000600872	PATJ	Q8NI35	1801 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	UBE4B	O95155	1302 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	PVALEF	A0A1B0GWK0	134 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF197	O14709	1029 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	GABRD	O14764	452 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	SLFN14	P0C7P3	912 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	CMA1	P23946	247 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	AFM	P43652	599 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	TEAD2	Q15562	447 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	CCDC142	Q17RM4	750 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	SV2C	Q496J9	727 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	SLC39A12	Q504Y0	691 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	PDZD4	Q76G19	769 aa	Predicted RBP	13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	OSTM1	Q86WC4	334 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	CSGALNACT2	Q8N6G5	542 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	LRRC52	Q8N7C0	313 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	DTWD2	Q8NBA8	298 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	LEMD2	Q8NC56	503 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	PSMG2	Q969U7	264 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	RSPRY1	Q96DX4	576 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	PAGE5	Q96GU1	130 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	FOXQ1	Q9C009	403 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	IL21	Q9HBE4	155 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	ASAH2	Q9NR71	780 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	ITGA11	Q9UKX5	1188 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	RIF1	Q5UIP0	2472 aa	Known RBP	13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	ANAPC1	Q9H1A4	1944 aa		13.76	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF233	A6NK53	670 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	PROB1	E7EW31	1015 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	ARNTL	O00327	626 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	CLIC2	O15247	247 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	HCRT	O43612	131 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	LRRN2	O75325	713 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	MYL4	P12829	197 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	PFKFB1	P16118	471 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	PNPLA4	P41247	253 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	STK4	Q13043	487 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	FZD5	Q13467	585 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	SNW1	Q13573	536 aa	Known RBP	13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	SLC44A4	Q53GD3	710 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	STXBP5	Q5T5C0	1151 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	CYP4A22	Q5TCH4	519 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	IQCE	Q6IPM2	695 aa		13.75	□□□□□ -0.21

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