RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 C1orf210Q8IVY1 113 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 SLC44A3Q8N4M1 653 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 GOLGA5Q8TBA6 731 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 SAAL1Q96ER3 474 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 PLEKHA4Q9H4M7 779 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRIM28-214ENST00000600840 HCFC1R1Q9NWW0 138 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 WNT16Q9UBV4 365 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
TRIM28-214ENST00000600840 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.896e-7■■■□□ 15.3
TRIM28-214ENST00000600840 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
TRIM28-214ENST00000600840 GOLGA8IPA6NC78 632 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 GOLGA8JA6NMD2 632 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CCL16O15467 120 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CALUO43852 315 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 EXTL3O43909 919 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 B3GAT3O94766 335 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ADRB1P08588 477 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CLTAP09496 248 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CCDC192P0DO97 292 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ZNF18P17022 549 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 FGFR3P22607 806 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 OR1D2P34982 312 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 STX17P56962 302 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 FKBP3Q00688 224 aaKnown RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ADAM9Q13443 819 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 UPP1Q16831 310 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ZNF568Q3ZCX4 644 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CDKAL1Q5VV42 579 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 SPATA1Q5VX52 437 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ARMCX5Q6P1M9 558 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 GRASPQ7Z6J2 395 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 FILIP1Q7Z7B0 1213 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 DHX40Q8IX18 779 aaKnown RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 GPD1LQ8N335 351 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 XXYLT1Q8NBI6 393 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CXorf38Q8TB03 319 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ITFG1Q8TB96 612 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 GPR152Q8TDT2 470 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 HDAC7Q8WUI4 952 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 POMGNT1Q8WZA1 660 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 C18orf25Q96B23 403 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 EEF2KMTQ96G04 330 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 DDX27Q96GQ7 796 aaKnown RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 FAM213AQ9BRX8 229 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 MSTO1Q9BUK6 570 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 FOXQ1Q9C009 403 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 PIDD1Q9HB75 910 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ZDHHC7Q9NXF8 308 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ANKFY1Q9P2R3 1169 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 EPS15L1Q9UBC2 864 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
TRIM28-214ENST00000600840 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 SPTBN2O15020 2390 aa9.46□□□□□ -0.9
TRIM28-214ENST00000600840 ACACBO00763 2458 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 LRRC10BA6NIK2 292 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 LACTBL1A8MY62 500 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 IKBKBO14920 756 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 LDHAP00338 332 aaKnown RBP9.45□□□□□ -0.9
TRIM28-214ENST00000600840 C1RP00736 705 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 C8AP07357 584 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 HARSP12081 509 aaKnown RBP9.45□□□□□ -0.9
TRIM28-214ENST00000600840 LAMP2P13473 410 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 KCNE1P15382 129 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 NR2F2P24468 414 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 ENPEPQ07075 957 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 STIM1Q13586 685 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 RAB33AQ14088 237 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 KYAT1Q16773 422 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 DCLRE1AQ6PJP8 1040 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 CYP26C1Q6V0L0 522 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 HS2ST1Q7LGA3 356 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 APTXQ7Z2E3 356 aaKnown RBP9.45□□□□□ -0.9
TRIM28-214ENST00000600840 BRSK2Q8IWQ3 736 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 PARD3BQ8TEW8 1205 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 FGF14Q92915 247 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 BICD1Q96G01 975 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 SRRTQ9BXP5 876 aaKnown RBP9.45□□□□□ -0.9
TRIM28-214ENST00000600840 PLEKHA5Q9HAU0 1116 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 KIAA1586Q9HCI6 787 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
TRIM28-214ENST00000600840 CNTN3Q9P232 1028 aa9.45□□□□□ -0.9
TRIM28-214ENST00000600840 IGSF9Q9P2J2 1179 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms