RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TRAPPC10P48553 1259 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 AARSP49588 968 aaKnown RBP eCLIP11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 CDR1P51861 262 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PDIA5Q14554 519 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TEAD2Q15562 447 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 BEST2Q8NFU1 509 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SHKBP1Q8TBC3 707 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PLIN2Q99541 437 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 CHRDQ9H2X0 955 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TOPORSQ9NS56 1045 aaPredicted RBP11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 YIPF1Q9Y548 306 aa11.01□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 LRRK2Q5S007 2527 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ANAPC1Q9H1A4 1944 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TTC26A0AVF1 554 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 M0QZQ0 153 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TRAPPC3O43617 180 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SOAT2O75908 522 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MYL4P12829 197 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 GUCY2CP25092 1073 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 GDI1P31150 447 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MCM4P33991 863 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 YARSP54577 528 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SLC12A3P55017 1021 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SATB1Q01826 763 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MCL1Q07820 350 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SRSF5Q13243 272 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ARSHQ5FYA8 562 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 HYIQ5T013 277 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SLC39A4Q6P5W5 647 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TXNDC11Q6PKC3 985 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PDZD4Q76G19 769 aaPredicted RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZSCAN18Q8TBC5 510 aaPredicted RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 HNRNPLLQ8WVV9 542 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PGLYRP2Q96PD5 576 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 UBL7Q96S82 380 aaPredicted RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZFP14Q9HCL3 533 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 RBM12Q9NTZ6 932 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 AFF4Q9UHB7 1163 aaKnown RBP11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PCDHB8Q9UN66 801 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 NUB1Q9Y5A7 615 aa11□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 HEPACAM2A8MVW5 462 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 HYAL3O43820 417 aaPredicted RBP10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TOM1L1O75674 476 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MICAL2O94851 1124 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 CHRNB1P11230 501 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PLS3P13797 630 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 LRPAP1P30533 357 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MAGEA9P43362 315 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 NCKAP1LP55160 1127 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TMEM119Q4V9L6 283 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TPGS2Q68CL5 300 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZNF280DQ6N043 979 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 KIAA1211LQ6NV74 962 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZNF852Q6ZMS4 543 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 Q6ZS52 159 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 GAREM2Q75VX8 874 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SYT2Q8N9I0 419 aaPredicted RBP10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SPIRE2Q8WWL2 714 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SMARCD2Q92925 531 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 FIZ1Q96SL8 496 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TCHPQ9BT92 498 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TRMT61BQ9BVS5 477 aaKnown RBP10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 IKZF4Q9H2S9 585 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 BRD9Q9H8M2 597 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TRPV4Q9HBA0 871 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SLC38A7Q9NVC3 462 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 KLK13Q9UKR3 277 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 DNM3Q9UQ16 869 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PIAS3Q9Y6X2 628 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MGAQ8IWI9 3026 aa10.99□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 A0A1W2PRU2 124 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 MTMR11A4FU01 709 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 LACTBL1A8MY62 500 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 TISP43B9A030 160 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 H7C4K7 107 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 OAZ2O95190 189 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 CPB1P15086 417 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PSMC3P17980 439 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ELF1P32519 619 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 PRPHP41219 470 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 HMGN5P82970 282 aaKnown RBP10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 GRIN1Q05586 938 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 DUSP4Q13115 394 aa10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 ENOX2Q16206 610 aaKnown RBP10.98□□□□□ -0.65
MIA-RAB4B-201ENST00000600729 SCARA3Q6AZY7 606 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms