RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 PLS3P13797 630 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 GUCY2CP25092 1073 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
IRF3-225ENST00000600022 MAGEA9P43362 315 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 SLC12A3P55017 1021 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 MCL1Q07820 350 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.03
IRF3-225ENST00000600022 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 ZNF280DQ6N043 979 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
IRF3-225ENST00000600022 TMC8Q8IU68 726 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 MFSD6LQ8IWD5 586 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 CEP57L1Q8IYX8 460 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 BEST2Q8NFU1 509 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 IRF7Q92985 503 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 ZFYVE19Q96K21 471 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 CNTNAP3BQ96NU0 1288 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 MKNK1Q9BUB5 465 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 CNTNAP3Q9BZ76 1288 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 MRPS17Q9Y2R5 130 aaKnown RBP14.86□□□□□ -0.03
IRF3-225ENST00000600022 YIPF1Q9Y548 306 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 TPRP12270 2363 aaKnown RBP14.86□□□□□ -0.03
IRF3-225ENST00000600022 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
IRF3-225ENST00000600022 MAN2B1O00754 1011 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 ZNF263O14978 683 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 CLDN3O15551 220 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 HRO43593 1189 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
IRF3-225ENST00000600022 OAZ2O95190 189 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 UBA7P41226 1012 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 SPEM2Q0P670 501 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 STRN3Q13033 797 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 E2F4Q16254 413 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 TXNDC11Q6PKC3 985 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 Q6ZS52 159 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 ELOA2Q8IYF1 753 aaPredicted RBP14.85□□□□□ -0.03
IRF3-225ENST00000600022 SYT2Q8N9I0 419 aaPredicted RBP14.85□□□□□ -0.03
IRF3-225ENST00000600022 APPL2Q8NEU8 664 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 SPIRE2Q8WWL2 714 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 KIF12Q96FN5 646 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 GRPEL1Q9HAV7 217 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 TRPV4Q9HBA0 871 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 ASAH2Q9NR71 780 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 CCDC39Q9UFE4 941 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 STK24Q9Y6E0 443 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.85□□□□□ -0.03
IRF3-225ENST00000600022 CITO14578 2027 aa14.85□□□□□ -0.03
IRF3-225ENST00000600022 SLC38A8A6NNN8 435 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 CHURC1-FNTBB4DL54 471 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 POLR2DO15514 142 aaKnown RBP14.84□□□□□ -0.03
IRF3-225ENST00000600022 FAM189A1O60320 539 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 PLA2G4BP0C869 781 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 LRPAP1P30533 357 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 MATR3P43243 847 aaKnown RBP eCLIP14.84□□□□□ -0.03
IRF3-225ENST00000600022 FNTBP49356 437 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 AARSP49588 968 aaKnown RBP eCLIP14.84□□□□□ -0.032e-7■■■■□ 26.2
IRF3-225ENST00000600022 YWHAHQ04917 246 aaPredicted RBP14.84□□□□□ -0.03
IRF3-225ENST00000600022 ENOX2Q16206 610 aaKnown RBP14.84□□□□□ -0.03
IRF3-225ENST00000600022 HYIQ5T013 277 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 CENPPQ6IPU0 288 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 GAREM2Q75VX8 874 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 ARID3BQ8IVW6 561 aaPredicted RBP14.84□□□□□ -0.03
IRF3-225ENST00000600022 ELMOD1Q8N336 334 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 IKZF4Q9H2S9 585 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 SLITRK6Q9H5Y7 841 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 C17orf75Q9HAS0 396 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 TRPV5Q9NQA5 729 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 GTSE1Q9NYZ3 720 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 USP18Q9UMW8 372 aa14.84□□□□□ -0.03
IRF3-225ENST00000600022 KRT37O76014 449 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 CLTAP09496 248 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 SLFN14P0C7P3 912 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 GPR17Q13304 367 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 DHX8Q14562 1220 aaKnown RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 TMEM119Q4V9L6 283 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 SLC39A4Q6P5W5 647 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 ZPBP2Q6X784 338 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 MAMSTRQ6ZN01 415 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 HAUS6Q7Z4H7 955 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 DNAJB7Q7Z6W7 309 aaPredicted RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 DHX58Q96C10 678 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 NAT10Q9H0A0 1025 aaKnown RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 SMG9Q9H0W8 520 aaKnown RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 CUEDC2Q9H467 287 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 MAGEF1Q9HAY2 307 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 KMT2BQ9UMN6 2715 aaPredicted RBP14.83□□□□□ -0.04
IRF3-225ENST00000600022 ACACBO00763 2458 aa14.83□□□□□ -0.04
IRF3-225ENST00000600022 LAMA1P25391 3075 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 MTMR11A4FU01 709 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 TISP43B9A030 160 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 SMC2O95347 1197 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 CXCL12P48061 93 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 NCKAP1LP55160 1127 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 LILRA4P59901 499 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 TYRO3Q06418 890 aa14.82□□□□□ -0.04
IRF3-225ENST00000600022 TNK2Q07912 1038 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms