RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 TMEM176AQ96HP8 235 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 FAM124BQ9H5Z6 455 aaPredicted RBP24.87■■□□□ 1.57
SYMPK-212ENST00000598896 INTUQ9ULD6 942 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 CAPN6Q9Y6Q1 641 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 B4GALT3O60512 393 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 CYP1A1P04798 512 aaPredicted RBP24.87■■□□□ 1.57
SYMPK-212ENST00000598896 PAEPP09466 180 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 LIMS2Q7Z4I7 341 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 SLC35F6Q8N357 371 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 SECISBP2LQ93073 1101 aaKnown RBP24.87■■□□□ 1.57
SYMPK-212ENST00000598896 CYFIP2Q96F07 1278 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 THAP2Q9H0W7 228 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 ELAC1Q9H777 363 aaKnown RBP24.87■■□□□ 1.57
SYMPK-212ENST00000598896 L1RE1Q9UN81 338 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 TTC3P53804 2025 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 MICAL3Q7RTP6 2002 aa24.87■■□□□ 1.57
SYMPK-212ENST00000598896 TRIM43BA6NCK2 446 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 RTN2O75298 545 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 MOCS3O95396 460 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 TUBB4AP04350 444 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 EN2P19622 333 aaPredicted RBP24.86■■□□□ 1.57
SYMPK-212ENST00000598896 TUSC3Q13454 348 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 CRIPAKQ8N1N5 446 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 TRIM43Q96BQ3 446 aaPredicted RBP24.86■■□□□ 1.57
SYMPK-212ENST00000598896 MYO1AQ9UBC5 1043 aa24.86■■□□□ 1.57
SYMPK-212ENST00000598896 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.86■■□□□ 1.57
SYMPK-212ENST00000598896 HCRTO43612 131 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 BUB1O43683 1085 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 RPL9P32969 192 aaKnown RBP24.85■■□□□ 1.57
SYMPK-212ENST00000598896 UBE2Q1Q7Z7E8 422 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 PRDM5Q9NQX1 630 aaPredicted RBP24.85■■□□□ 1.57
SYMPK-212ENST00000598896 ANKRD62A6NC57 917 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 BTNL10A8MVZ5 291 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 TMEM253P0C7T8 217 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 CD19P15391 556 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 NOMO3P69849 1222 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 NOMO2Q5JPE7 1267 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 NAA35Q5VZE5 725 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 ZNF280BQ86YH2 543 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 TTC39CQ8N584 583 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 CPA5Q8WXQ8 436 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 ARHGEF26Q96DR7 871 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 PDCL3Q9H2J4 239 aa24.85■■□□□ 1.57
SYMPK-212ENST00000598896 DDHD2O94830 711 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 CAPN2P17655 700 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 ACAD10Q6JQN1 1059 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 APPL2Q8NEU8 664 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 KIF18AQ8NI77 898 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 NT5C1AQ9BXI3 368 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 TBC1D13Q9NVG8 400 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 PCDHB7Q9Y5E2 793 aa24.84■■□□□ 1.57
SYMPK-212ENST00000598896 TACC1O75410 805 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 GATMP50440 423 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 CENPCQ03188 943 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 PAN2Q504Q3 1202 aaKnown RBP24.83■■□□□ 1.57
SYMPK-212ENST00000598896 CD300LGQ6UXG3 332 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 FAM43BQ6ZT52 329 aaPredicted RBP24.83■■□□□ 1.57
SYMPK-212ENST00000598896 PDCL2Q8N4E4 241 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 OR6B3Q8NGW1 331 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 CTNNBL1Q8WYA6 563 aaPredicted RBP24.83■■□□□ 1.57
SYMPK-212ENST00000598896 PCDHGC3Q9UN70 934 aa24.83■■□□□ 1.57
SYMPK-212ENST00000598896 F8W810 466 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 CYB561D2O14569 222 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 HUS1O60921 280 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 AARSP49588 968 aaKnown RBP eCLIP24.83■■□□□ 1.56
SYMPK-212ENST00000598896 DSC1Q08554 894 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 TRIM72Q6ZMU5 477 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 ADGRF2Q8IZF7 708 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 TOP6BLQ8N6T0 577 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 HEXIM2Q96MH2 286 aaKnown RBP24.83■■□□□ 1.56
SYMPK-212ENST00000598896 DPEP3Q9H4B8 488 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 NCANO14594 1321 aa24.83■■□□□ 1.56
SYMPK-212ENST00000598896 MYH10P35580 1976 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 KIAA0355O15063 1070 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 B3GAT3O94766 335 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 TIMP1P01033 207 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 LMO2P25791 158 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.82■■□□□ 1.56
SYMPK-212ENST00000598896 RNF10Q8N5U6 811 aaKnown RBP24.82■■□□□ 1.56
SYMPK-212ENST00000598896 C12orf29Q8N999 325 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 URGCPQ8TCY9 931 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 SENP8Q96LD8 212 aa24.82■■□□□ 1.56
SYMPK-212ENST00000598896 ATMINO43313 823 aaPredicted RBP24.81■■□□□ 1.56
SYMPK-212ENST00000598896 ITGB1P05556 798 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 TIGD5Q53EQ6 642 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 CNKSR3Q6P9H4 555 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.81■■□□□ 1.563e-15■■■■■ 35.6
SYMPK-212ENST00000598896 DPH6Q7L8W6 267 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 ACOT1Q86TX2 421 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 OSTM1Q86WC4 334 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 HASPINQ8TF76 798 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 DDX27Q96GQ7 796 aaKnown RBP24.81■■□□□ 1.56
SYMPK-212ENST00000598896 NOX5Q96PH1 765 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 OSGEPQ9NPF4 335 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 CHORDC1Q9UHD1 332 aaPredicted RBP24.81■■□□□ 1.56
SYMPK-212ENST00000598896 LTBP2Q14767 1821 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 A0A0A6YYK5 440 aaPredicted RBP24.81■■□□□ 1.56
SYMPK-212ENST00000598896 A8MXQ7 604 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 VDRP11473 427 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 CASQ1P31415 396 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms