RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SF3A2Q15428 464 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 CCDC6Q16204 474 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 KRT79Q5XKE5 535 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 C1orf228Q6PIY5 440 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 PSMG2Q969U7 264 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 KIF12Q96FN5 646 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 ATXN3LQ9H3M9 355 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 RXFP3Q9NSD7 469 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 CLTAP09496 248 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 PLD1Q13393 1074 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 ARHGAP29Q52LW3 1261 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 GPR158Q5T848 1215 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 ZPBP2Q6X784 338 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 DSTYKQ6XUX3 929 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 CEP68Q76N32 757 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 USP37Q86T82 979 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 OXCT2Q9BYC2 517 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 ASB3Q9Y575 518 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 STK24Q9Y6E0 443 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 RALGAPA1Q6GYQ0 2036 aa17.87■□□□□ 0.45
SHKBP1-215ENST00000597649 NPHP3-ACAD11A0A0J9YXS1 232 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 STX6O43752 255 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 FAM189A1O60320 539 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 CYP3A5P20815 502 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 U2AF2P26368 475 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 GABRR2P28476 465 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 PXNP49023 591 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 MYBPC2Q14324 1141 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 ENOX2Q16206 610 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 N4BP2L1Q5TBK1 243 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 OVOS1Q6IE37 1185 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 PNMA5Q96PV4 448 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 LPIN3Q9BQK8 851 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 SMG9Q9H0W8 520 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 ARRDC1-AS1Q9H2J1 176 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 POLR3BQ9NW08 1133 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 OBP2AQ9NY56 170 aa17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 UBQLN1Q9UMX0 589 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 NOL7Q9UMY1 257 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-215ENST00000597649 DPYSL4O14531 572 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 ADRB2P07550 413 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 TYMPP19971 482 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 KCNA4P22459 653 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 WEE1P30291 646 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 LILRA4P59901 499 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 CYP4F8P98187 520 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 ZRSR1Q15695 479 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 ARSHQ5FYA8 562 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 SYNPOQ8N3V7 929 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 OR10T2Q8NGX3 314 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 CHFRQ96EP1 664 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 PLIN2Q99541 437 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 TIPINQ9BVW5 301 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 SLC46A2Q9BY10 475 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 RAB34Q9BZG1 259 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 TASP1Q9H6P5 420 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 IL21Q9HBE4 155 aa17.85■□□□□ 0.45
SHKBP1-215ENST00000597649 PDCD11Q14690 1871 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 OTOL1A6NHN0 477 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 PMLP29590 882 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 MATR3P43243 847 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 RAP1GAPP47736 663 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 LIMK1P53667 647 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 SMTNP53814 917 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 SLC12A3P55017 1021 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 HYIQ5T013 277 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 KBTBD6Q86V97 674 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 SYT2Q8N9I0 419 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 FAM200AQ8TCP9 573 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 BPIFB1Q8TDL5 484 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 SMOC1Q9H4F8 434 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 GKN1Q9NS71 199 aa17.84■□□□□ 0.45
SHKBP1-215ENST00000597649 FOXD2O60548 495 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 ZNF806P0C7X5 589 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 ATF6P18850 670 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 ITPRIPL2Q3MIP1 535 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 AASDHQ4L235 1098 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 SPATA1Q5VX52 437 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 FSTL4Q6MZW2 842 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 ARMCX5Q6P1M9 558 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 DTHD1Q6ZMT9 781 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 HAUS6Q7Z4H7 955 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 GAB3Q8WWW8 586 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 FAM83CQ9BQN1 747 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 FBRSL1Q9HCM7 1045 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 KCNG1Q9UIX4 513 aa17.83■□□□□ 0.44
SHKBP1-215ENST00000597649 FGF19O95750 216 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 PRPHP41219 470 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 NCKAP1LP55160 1127 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 PLCB2Q00722 1185 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 PPP2R3AQ06190 1150 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 SLC39A12Q504Y0 691 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 TMEM196Q5HYL7 178 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 C9orf57Q5W0N0 161 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 IL31Q6EBC2 164 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms