RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 MAPRE3Q9UPY8 281 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 GH1P01241 217 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 SKP1P63208 163 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 TGM3Q08188 693 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 NSUN2Q08J23 767 aaKnown RBP eCLIP8.37□□□□□ -1.07
FARP1-219ENST00000596580 EMC2Q15006 297 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 PI16Q6UXB8 463 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 CDR2LQ86X02 465 aaPredicted RBP8.37□□□□□ -1.07
FARP1-219ENST00000596580 PLD3Q8IV08 490 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 DDIASQ8IXT1 998 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 SEPT1Q8WYJ6 367 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 WDR91A4D1P6 747 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 KCNN4O15554 427 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 STRNO43815 780 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 KPNA6O60684 536 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 ELAVL2Q12926 359 aaKnown RBP8.37□□□□□ -1.07
FARP1-219ENST00000596580 PLD1Q13393 1074 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 CYTH1Q15438 398 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 TFDP3Q5H9I0 405 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 SZRD1Q7Z422 152 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 JADE3Q92613 823 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 EHD4Q9H223 541 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 FBXO2Q9UK22 296 aaPredicted RBP8.37□□□□□ -1.07
FARP1-219ENST00000596580 FBXL5Q9UKA1 691 aa8.37□□□□□ -1.07
FARP1-219ENST00000596580 PRMT9Q6P2P2 845 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 ANLNQ9NQW6 1124 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 TRPC1P48995 793 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 UBXN2AP68543 259 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 RABGAP1LQ5R372 815 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 ABHD8Q96I13 439 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PEX5P50542 639 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 LDHDQ86WU2 507 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PLEKHA8Q96JA3 519 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PKP3Q9Y446 797 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 RPSAP08865 295 aaKnown RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 NR2C2P49116 596 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 OSTNP61366 133 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 AMPD2Q01433 879 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 SYTL3Q4VX76 610 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 SWSAP1Q6NVH7 229 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 VPS50Q96JG6 964 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PAIP2BQ9ULR5 123 aaKnown RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 NPTXRO95502 500 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PKN3Q6P5Z2 889 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 EIF2S1P05198 315 aaKnown RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 SEPT8Q92599 483 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
FARP1-219ENST00000596580 MAF1Q9H063 256 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 SMYD3Q9H7B4 428 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 KCNK10P57789 538 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 ZNF544Q6NX49 715 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PID1Q7Z2X4 250 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 COL23A1Q86Y22 540 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 UNC45BQ8IWX7 931 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 MMADHCQ9H3L0 296 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 FIS1Q9Y3D6 152 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 C1orf167Q5SNV9 1468 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 POU5F1BQ06416 359 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 MRNIPQ6NTE8 343 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 ARHGAP23Q9P227 1491 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 PCSK2P16519 638 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 ATICP31939 592 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 PRKCQQ04759 706 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 TAS2R42Q7RTR8 314 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 LRRC43Q8N309 656 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 DYDC2Q96IM9 177 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 NR1H4Q96RI1 486 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 TMCO1Q9UM00 188 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 RNF149Q8NC42 400 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 DDX47Q9H0S4 455 aaKnown RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 PHKG1Q16816 387 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 SLC22A9Q8IVM8 553 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 CDC26Q8NHZ8 85 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 STARD8Q92502 1023 aa8.36□□□□□ -1.07
FARP1-219ENST00000596580 MAGEB10Q96LZ2 347 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 RPAP3Q9H6T3 665 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
FARP1-219ENST00000596580 VPS4BO75351 444 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 SOX6P35712 828 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 GRIK1P39086 918 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 USP38Q8NB14 1042 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 DNAJC7Q99615 494 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 TTC7AQ9ULT0 858 aaPredicted RBP8.35□□□□□ -1.07
FARP1-219ENST00000596580 TGFB3P10600 412 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 IGDCC4Q8TDY8 1250 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 CCT8L2Q96SF2 557 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 ZC3H4Q9UPT8 1303 aaKnown RBP8.35□□□□□ -1.07
FARP1-219ENST00000596580 LTN1O94822 1766 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 DAB1O75553 588 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 RASSF9O75901 435 aa8.35□□□□□ -1.07
FARP1-219ENST00000596580 HARS2P49590 506 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms