RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TMEM209Q96SK2 561 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 KCNH6Q9H252 994 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 GDE1Q9NZC3 331 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 CEP72Q9P209 647 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 WDFY4Q6ZS81 3184 aa14.06□□□□□ -0.16
USE1-207ENST00000596136 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 TNNC2P02585 160 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 CYP2J2P51589 502 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 CLDN10P78369 228 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 TWF1Q12792 350 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 KCNB1Q14721 858 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 LMBRD2Q68DH5 695 aaPredicted RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 POTEHQ6S545 545 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 DPH6Q7L8W6 267 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 TRAPPC11Q7Z392 1133 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 LRRTM3Q86VH5 581 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 PDCL2Q8N4E4 241 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 TOP6BLQ8N6T0 577 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 RDH13Q8NBN7 331 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 ATAD1Q8NBU5 361 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 LEMD2Q8NC56 503 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 ENGASEQ8NFI3 743 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 NOC3LQ8WTT2 800 aaKnown RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 ZNF512Q96ME7 567 aaPredicted RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 CGRRF1Q99675 332 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 LRRC3Q9BY71 257 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 DNAJC25Q9H1X3 360 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 L1RE1Q9UN81 338 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 MRPS23Q9Y3D9 190 aaKnown RBP14.05□□□□□ -0.16
USE1-207ENST00000596136 YIPF1Q9Y548 306 aa14.05□□□□□ -0.16
USE1-207ENST00000596136 ZNF197O14709 1029 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 GABRDO14764 452 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 MOSPD3O75425 235 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 CCR2P41597 374 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 PLD1Q13393 1074 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
USE1-207ENST00000596136 NFIL3Q16649 462 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 IQCEQ6IPM2 695 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 PARM1Q6UWI2 310 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 MTSS1LQ765P7 747 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 ELMOD1Q8N336 334 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 ZNF516Q92618 1163 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 FGF14Q92915 247 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 PGLYRP2Q96PD5 576 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 CORO1BQ9BR76 489 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 WNT16Q9UBV4 365 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 NUMBLQ9Y6R0 609 aa14.04□□□□□ -0.16
USE1-207ENST00000596136 NARSO43776 548 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 EXOC3O60645 756 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 HUS1O60921 280 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 KIF20AO95235 890 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 STAU1O95793 577 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 CST3P01034 146 aaPredicted RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 PDGFBP01127 241 aaPredicted RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 KRT19P08727 400 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 FAM163BP0C2L3 166 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SRFP11831 508 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 TUFMP49411 452 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 BFSP1Q12934 665 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 MYO1EQ12965 1108 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SLC39A12Q504Y0 691 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 CYP4A22Q5TCH4 519 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 DCP1BQ8IZD4 617 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SPPL2BQ8TCT7 592 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 PLEKHO2Q8TD55 490 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 CCDC47Q96A33 483 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 TCEAL4Q96EI5 215 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 HPDLQ96IR7 371 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 FNBP1Q96RU3 617 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 PKMYT1Q99640 499 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 RPP25Q9BUL9 199 aaKnown RBP14.03□□□□□ -0.16
USE1-207ENST00000596136 SLC2A4RGQ9NR83 387 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SLC27A5Q9Y2P5 690 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 SNX9Q9Y5X1 595 aa14.03□□□□□ -0.16
USE1-207ENST00000596136 KMT2EQ8IZD2 1858 aa14.02□□□□□ -0.16
USE1-207ENST00000596136 NRG2O14511 850 aaPredicted RBP14.02□□□□□ -0.17
USE1-207ENST00000596136 MAPK13O15264 365 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 DLATP10515 647 aaKnown RBP14.02□□□□□ -0.17
USE1-207ENST00000596136 CEBPBP17676 345 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 TNNI1P19237 187 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 ALDH1A3P47895 512 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 LHX1P48742 406 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 AP3M2P53677 418 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 EPHB3P54753 998 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 MCCD1P59942 119 aaPredicted RBP14.02□□□□□ -0.17
USE1-207ENST00000596136 PDZD4Q76G19 769 aaPredicted RBP14.02□□□□□ -0.17
USE1-207ENST00000596136 DNAJB7Q7Z6W7 309 aaPredicted RBP14.02□□□□□ -0.17
USE1-207ENST00000596136 TMC8Q8IU68 726 aa14.02□□□□□ -0.17
USE1-207ENST00000596136 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms