RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 TPGS2Q68CL5 300 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 GRASPQ7Z6J2 395 aaPredicted RBP11.99□□□□□ -0.49
VRK3-210ENST00000596121 TTC9BQ8N6N2 239 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 ATAD1Q8NBU5 361 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 TMC2Q8TDI7 906 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 ZNF560Q96MR9 790 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 MED15Q96RN5 788 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 MYADMQ96S97 322 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 CYP4F11Q9HBI6 524 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 WDR6Q9NNW5 1121 aaKnown RBP11.99□□□□□ -0.49
VRK3-210ENST00000596121 CEP72Q9P209 647 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 DNMT3BQ9UBC3 853 aaKnown RBP11.99□□□□□ -0.49
VRK3-210ENST00000596121 AFF4Q9UHB7 1163 aaKnown RBP11.99□□□□□ -0.49
VRK3-210ENST00000596121 DPP7Q9UHL4 492 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 HOOK1Q9UJC3 728 aaKnown RBP11.99□□□□□ -0.49
VRK3-210ENST00000596121 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 NOTCH4Q99466 2003 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 MTMR11A4FU01 709 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 GABRDO14764 452 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 MAPK13O15264 365 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 SOAT2O75908 522 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 HNRNPA1P09651 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
VRK3-210ENST00000596121 TRIM49P0CI25 452 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 TRIM49CP0CI26 452 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 ACAT1P24752 427 aaKnown RBP11.98□□□□□ -0.49
VRK3-210ENST00000596121 LMO2P25791 158 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 HOXA9P31269 272 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 PSMC2P35998 433 aaKnown RBP11.98□□□□□ -0.49
VRK3-210ENST00000596121 VAMP7P51809 220 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 DUSP4Q13115 394 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 ZACNQ401N2 412 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 CYP26C1Q6V0L0 522 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 SV2AQ7L0J3 742 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 TOP6BLQ8N6T0 577 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 LPIN3Q9BQK8 851 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 MRPL45Q9BRJ2 306 aaKnown RBP11.98□□□□□ -0.49
VRK3-210ENST00000596121 CLSTN2Q9H4D0 955 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 MUTYHQ9UIF7 546 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 DSEQ9UL01 958 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 POLIQ9UNA4 740 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 INSL5Q9Y5Q6 135 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 TRIOO75962 3097 aa11.98□□□□□ -0.49
VRK3-210ENST00000596121 DENND4AQ7Z401 1863 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 CLUHO75153 1309 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 PRRG1O14668 218 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 HUS1O60921 280 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 ATP2C2O75185 946 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 POU2F2P09086 479 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 CCNE1P24864 410 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 RPL13P26373 211 aaKnown RBP11.97□□□□□ -0.49
VRK3-210ENST00000596121 GCLMP48507 274 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 TWF1Q12792 350 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 SLC5A9Q2M3M2 681 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 KLHL10Q6JEL2 608 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 TTI2Q6NXR4 508 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 ELMSAN1Q6PJG2 1045 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 CCDC149Q6ZUS6 474 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 METTL23Q86XA0 190 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 ST13P5Q8NFI4 369 aaPredicted RBP11.97□□□□□ -0.49
VRK3-210ENST00000596121 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 DHTKD1Q96HY7 919 aaPredicted RBP11.97□□□□□ -0.49
VRK3-210ENST00000596121 OXCT2Q9BYC2 517 aaPredicted RBP11.97□□□□□ -0.49
VRK3-210ENST00000596121 SDCBP2Q9H190 292 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 PIDD1Q9HB75 910 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 DDX43Q9NXZ2 648 aaKnown RBP11.97□□□□□ -0.49
VRK3-210ENST00000596121 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
VRK3-210ENST00000596121 DOCK8Q8NF50 2099 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 MYO10Q9HD67 2058 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 MYBPHLA2RUH7 354 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 PI4K2BG5E9Z4 385 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 IKBKBO14920 756 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 CETN3O15182 167 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
VRK3-210ENST00000596121 HLA-DRAP01903 254 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 ASGR2P07307 311 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 WARSP23381 471 aaKnown RBP11.96□□□□□ -0.49
VRK3-210ENST00000596121 ELF1P32519 619 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 CCR2P41597 374 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 AP3M2P53677 418 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 CDH8P55286 799 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 STX17P56962 302 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 MYO1EQ12965 1108 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 BIRC3Q13489 604 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 TRPC3Q13507 836 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 NCOA4Q13772 614 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 SPOPLQ6IQ16 392 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 INTS8Q75QN2 995 aaKnown RBP11.96□□□□□ -0.49
VRK3-210ENST00000596121 RTL10Q7L3V2 364 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 ADGRF2Q8IZF7 708 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
VRK3-210ENST00000596121 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms