RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 XPOTO43592 962 aaKnown RBP10.82□□□□□ -0.68
LIG1-209ENST00000596104 EXTL3O43909 919 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 FOXD2O60548 495 aaPredicted RBP10.82□□□□□ -0.68
LIG1-209ENST00000596104 FGF19O95750 216 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 CYP11A1P05108 521 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 PLA2G4BP0C869 781 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 ATF6P18850 670 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 MATR3P43243 847 aaKnown RBP eCLIP10.82□□□□□ -0.68
LIG1-209ENST00000596104 CYP4F8P98187 520 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
LIG1-209ENST00000596104 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
LIG1-209ENST00000596104 KYAT1Q16773 422 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 ST3GAL2Q16842 350 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 TMEM119Q4V9L6 283 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 PKN3Q6P5Z2 889 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 HAUS6Q7Z4H7 955 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 BPIFB1Q8TDL5 484 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 SENP8Q96LD8 212 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 TSPAN18Q96SJ8 248 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 PLIN2Q99541 437 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 LARSQ9P2J5 1176 aaKnown RBP10.82□□□□□ -0.68
LIG1-209ENST00000596104 TICRRQ7Z2Z1 1910 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 MAP1BP46821 2468 aaKnown RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 A0A0B4J269 797 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ANO9A1A5B4 782 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 H0YCG3 227 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 PIRO00625 290 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 TM4SF5O14894 197 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 NFICP08651 508 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ODC1P11926 461 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 PAX3P23760 479 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 MCM2P49736 904 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 LIG4P49917 911 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 LIMK1P53667 647 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ARHGAP15Q53QZ3 475 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 C9orf57Q5W0N0 161 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 JADE1Q6IE81 842 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ARMCX5Q6P1M9 558 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 SLC39A4Q6P5W5 647 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 CEP68Q76N32 757 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ITIH5Q86UX2 942 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 CHFRQ96EP1 664 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 BICD1Q96G01 975 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ZSCAN31Q96LW9 406 aaPredicted RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 SLC46A2Q9BY10 475 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 ZCWPW1Q9H0M4 648 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 SMG9Q9H0W8 520 aaKnown RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 RPF1Q9H9Y2 349 aaKnown RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 SH2B1Q9NRF2 756 aaPredicted RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 RXFP3Q9NSD7 469 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
LIG1-209ENST00000596104 TBX20Q9UMR3 447 aa10.81□□□□□ -0.68
LIG1-209ENST00000596104 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 OTOL1A6NHN0 477 aaPredicted RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 HNRNPDLO14979 420 aaKnown RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 PMLP29590 882 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 CDC25CP30307 473 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 RAP1GAPP47736 663 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 ZNF131P52739 623 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 VEPH1Q14D04 833 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 SF3A2Q15428 464 aaKnown RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 ITPRIPL2Q3MIP1 535 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 TMEM196Q5HYL7 178 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 FSTL4Q6MZW2 842 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 TMEM150AQ86TG1 271 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 LRRTM3Q86VH5 581 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 CD302Q8IX05 232 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 RIN3Q8TB24 985 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 GAB3Q8WWW8 586 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 DDX1Q92499 740 aaKnown RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 LOXL4Q96JB6 756 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 FIZ1Q96SL8 496 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 KIF2CQ99661 725 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 SEPT5Q99719 369 aaPredicted RBP10.8□□□□□ -0.68
LIG1-209ENST00000596104 REEP2Q9BRK0 252 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 ARRDC1-AS1Q9H2J1 176 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 HPS4Q9NQG7 708 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 ODF2LQ9ULJ1 636 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 USP24Q9UPU5 2620 aa10.8□□□□□ -0.68
LIG1-209ENST00000596104 VWA3AA6NCI4 1184 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 TRDMT1O14717 391 aaKnown RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 AXIN1O15169 862 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 EPN2O95208 641 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 ZNF806P0C7X5 589 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 HMGA1P17096 107 aaKnown RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 SCP2P22307 547 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 CDR1P51861 262 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 TMEM132DQ14C87 1099 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 CCDC6Q16204 474 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms