RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 RUNX3Q13761 415 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 CALCRLQ16602 461 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 PDZD3Q86UT5 571 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 CATSPER3Q86XQ3 398 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 CHCHD4Q8N4Q1 142 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 ATAD1Q8NBU5 361 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 APPL2Q8NEU8 664 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 RPLP0P6Q8NHW5 317 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 NAP1L4Q99733 375 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 FAM83CQ9BQN1 747 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 CCDC94Q9BW85 323 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 SLC46A2Q9BY10 475 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 TPSD1Q9BZJ3 242 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 TOPORSQ9NS56 1045 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 OBP2AQ9NY56 170 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 GPSM3Q9Y4H4 160 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 WNT7AO00755 349 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 MED24O75448 989 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 APBB3O95704 486 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 ARSAP15289 507 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 KCNE1P15382 129 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 XBP1P17861 261 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 BCKDHBP21953 392 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 RPL9P32969 192 aaKnown RBP15□□□□□ -0.01
SHKBP1-208ENST00000595726 MAPK8P45983 427 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 MCM2P49736 904 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 SIM1P81133 766 aaPredicted RBP15□□□□□ -0.01
SHKBP1-208ENST00000595726 NR5A1Q13285 461 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 DMC1Q14565 340 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 COL28A1Q2UY09 1125 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 CENPPQ6IPU0 288 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 PADI6Q6TGC4 694 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 WASF1Q92558 559 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 PIGKQ92643 395 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 EZH1Q92800 747 aaPredicted RBP15□□□□□ -0.01
SHKBP1-208ENST00000595726 PCDHB8Q9UN66 801 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 CCL26Q9Y258 94 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 TNFSF13BQ9Y275 285 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 ADAMTS20P59510 1910 aa15□□□□□ -0.01
SHKBP1-208ENST00000595726 ANTXRLA6NF34 631 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 JAK2O60674 1132 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 CYP11B2P19099 503 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 YWHAHQ04917 246 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PLD1Q13393 1074 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 KARSQ15046 597 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PTPAQ15257 358 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 ARHGAP15Q53QZ3 475 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PMS2CLQ68D20 193 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 CYP2U1Q7Z449 544 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PROSER1Q86XN7 944 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PSMG2Q969U7 264 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 BBC3Q96PG8 261 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 ACO2Q99798 780 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 LPIN3Q9BQK8 851 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 TASP1Q9H6P5 420 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 TUBGCP4Q9UGJ1 667 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 EBF1Q9UH73 591 aa14.99□□□□□ -0.01
SHKBP1-208ENST00000595726 PCNX2A6NKB5 2137 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 K7ERI5 159 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 OAZ2O95190 189 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 DHPSP49366 369 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 EFNA5P52803 228 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 FAM193AP78312 1265 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 SPAG1Q07617 926 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 GPR17Q13304 367 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 ZNF568Q3ZCX4 644 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 SEZ6Q53EL9 994 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 SYT13Q7L8C5 426 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 ACAP3Q96P50 834 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 TARS2Q9BW92 718 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 IL21Q9HBE4 155 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 PTPRHQ9HD43 1115 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 LIMCH1Q9UPQ0 1083 aa14.98□□□□□ -0.01
SHKBP1-208ENST00000595726 NUP205Q92621 2012 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 MTMR11A4FU01 709 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 ARHGEF35A5YM69 484 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 HARSP12081 509 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 DRD1P21728 446 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 PSMD2Q13200 908 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 USP39Q53GS9 565 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 ZBTB45Q96K62 511 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 IFT74Q96LB3 600 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 MTMR9Q96QG7 549 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 NACC1Q96RE7 527 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 P2RY13Q9BPV8 354 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 SLC32A1Q9H598 525 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 FSCN3Q9NQT6 498 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 CNTN3Q9P232 1028 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 ASB3Q9Y575 518 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 TENM4Q6N022 2769 aa14.97□□□□□ -0.01
SHKBP1-208ENST00000595726 M0QZQ0 153 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 WEE1P30291 646 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 KRT2P35908 639 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 SLC10A6Q3KNW5 377 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms