RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TOP6BLQ8N6T0 577 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 NELFBQ8WX92 580 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 ELMO3Q96BJ8 720 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 PHF7Q9BWX1 381 aaPredicted RBP16.46■□□□□ 0.23
TRIM47-206ENST00000592942 ZCWPW1Q9H0M4 648 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 CRISPLD1Q9H336 500 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 AFF4Q9UHB7 1163 aaKnown RBP16.46■□□□□ 0.23
TRIM47-206ENST00000592942 NME7Q9Y5B8 376 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 TSC2P49815 1807 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 LOC730098B7Z3J9 87 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 HCRTO43612 131 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 LRRN2O75325 713 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 MTHFRP42898 656 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 MYO1EQ12965 1108 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 STIM1Q13586 685 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 KLHL10Q6JEL2 608 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 RTL10Q7L3V2 364 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 SLC7A14Q8TBB6 771 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 KBTBD7Q8WVZ9 684 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 TSG101Q99816 390 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 C2orf16Q68DN1 1984 aa16.45■□□□□ 0.22
TRIM47-206ENST00000592942 HUS1O60921 280 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM47-206ENST00000592942 LMO2P25791 158 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 HOXA9P31269 272 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 ATICP31939 592 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 GCLMP48507 274 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 STX17P56962 302 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 ADCY1Q08828 1119 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 NCOA4Q13772 614 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 TMEM86AQ8N2M4 240 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 ATAD1Q8NBU5 361 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 SPATA18Q8TC71 538 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 RIPOR3Q96MK2 946 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 NECTIN4Q96NY8 510 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 PKMYT1Q99640 499 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 TMLHEQ9NVH6 421 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 CTNND2Q9UQB3 1225 aa16.44■□□□□ 0.22
TRIM47-206ENST00000592942 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 SLC16A3O15427 465 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 CCL16O15467 120 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 PHACTR2O75167 634 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 POU2F2P09086 479 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 FAM163BP0C2L3 166 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 KRT13P13646 458 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 CPB1P15086 417 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 CDR1P51861 262 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 DUSP4Q13115 394 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 BIRC3Q13489 604 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 TRPC3Q13507 836 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 WDR72Q3MJ13 1102 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 PPM1LQ5SGD2 360 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 RBM43Q6ZSC3 357 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 GJD3Q8N144 294 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 THEM5Q8N1Q8 247 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 SMG7Q92540 1137 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 ACBD6Q9BR61 282 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 MRPL45Q9BRJ2 306 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 CYP4F11Q9HBI6 524 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 DDX43Q9NXZ2 648 aaKnown RBP16.43■□□□□ 0.22
TRIM47-206ENST00000592942 POLIQ9UNA4 740 aa16.43■□□□□ 0.22
TRIM47-206ENST00000592942 MTMR11A4FU01 709 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 TACC1O75410 805 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 WARSP23381 471 aaKnown RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 ACAT1P24752 427 aaKnown RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 ELF1P32519 619 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 GTF2H1P32780 548 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 PLA2G5P39877 138 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 PAK1Q13153 545 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 SGSM1Q2NKQ1 1148 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 ELMSAN1Q6PJG2 1045 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 CCDC149Q6ZUS6 474 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 ADGRF2Q8IZF7 708 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 TTC9BQ8N6N2 239 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 MLKLQ8NB16 471 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 SEMA4DQ92854 862 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 SYAP1Q96A49 352 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 CEP63Q96MT8 703 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 SDCBP2Q9H190 292 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 TMEM8AQ9HCN3 771 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms