RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 CD248Q9HCU0 757 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 SCINQ9Y6U3 715 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 SNAI1O95863 264 aaPredicted RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 TNNC2P02585 160 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 MYZAPP0CAP1 466 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 RDXP35241 583 aaKnown RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 PPTC7Q8NI37 304 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 GTF3C2Q8WUA4 911 aaPredicted RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 BRI3BPQ8WY22 251 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 C16orf70Q9BSU1 422 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 RPF1Q9H9Y2 349 aaKnown RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 PARVAQ9NVD7 372 aa18.05■□□□□ 0.48
LSM12-204ENST00000591247 PRMT7Q9NVM4 692 aaPredicted RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 NXF1Q9UBU9 619 aaKnown RBP18.05■□□□□ 0.48
LSM12-204ENST00000591247 CCL15-CCL14A0A0B4J2E2 113 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 TCRBV5S1A1TA0A578 114 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 KIF1CO43896 1103 aaKnown RBP18.04■□□□□ 0.48
LSM12-204ENST00000591247 RASSF9O75901 435 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 VTNP04004 478 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 RAP1GAPP47736 663 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 IFT88Q13099 833 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 CCL15Q16663 113 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 UBAP2Q5T6F2 1119 aaKnown RBP18.04■□□□□ 0.48
LSM12-204ENST00000591247 CCDC13Q8IYE1 715 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 CPB2Q96IY4 423 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 HEMGNQ9BXL5 484 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 R3HDM2Q9Y2K5 976 aaKnown RBP18.04■□□□□ 0.48
LSM12-204ENST00000591247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.04■□□□□ 0.48
LSM12-204ENST00000591247 LACTBL1A8MY62 500 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 PSTPIP1O43586 416 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 ECEL1O95672 775 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 KRT19P08727 400 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 STAG3L1P0CL83 205 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 TCF4P15884 667 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 PHKA2P46019 1235 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 ZNF252P-AS1Q0IIN9 211 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 C6orf89Q6UWU4 347 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 RHOT1Q8IXI2 618 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 C1orf127Q8N9H9 656 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
LSM12-204ENST00000591247 RUNDC3BQ96NL0 473 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 CLEC11AQ9Y240 323 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 AKT3Q9Y243 479 aa18.04■□□□□ 0.48
LSM12-204ENST00000591247 TMEM191CA6NGB0 347 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 GOLGA6L10A6NI86 522 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 RALAP11233 206 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 CETPP11597 493 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 FAM187BQ17R55 369 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 SLCO2A1Q92959 643 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 SCN4AP35499 1836 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 TP73O15350 636 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 LSM8O95777 96 aaKnown RBP18.03■□□□□ 0.48
LSM12-204ENST00000591247 SHBGP04278 402 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 GJC1P36383 396 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 PMS2P54278 862 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 CDH8P55286 799 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 KLF1Q13351 362 aaPredicted RBP18.03■□□□□ 0.48
LSM12-204ENST00000591247 ATP13A4Q4VNC1 1196 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 PPP1R2P3Q6NXS1 205 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 CCDC50Q8IVM0 306 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 GIMAP7Q8NHV1 300 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 CXorf38Q8TB03 319 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 ART4Q93070 314 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
LSM12-204ENST00000591247 RNF25Q96BH1 459 aaPredicted RBP18.03■□□□□ 0.48
LSM12-204ENST00000591247 SUFUQ9UMX1 484 aa18.03■□□□□ 0.48
LSM12-204ENST00000591247 PASKQ96RG2 1323 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 ZSWIM8A7E2V4 1837 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 E7EVH7 732 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 MAGEB2O15479 319 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 IL18RAPO95256 599 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 OGDHQ02218 1023 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 PREPLQ4J6C6 727 aaPredicted RBP18.02■□□□□ 0.48
LSM12-204ENST00000591247 SPDYCQ5MJ68 293 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 JADE1Q6IE81 842 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 MTHFD1LQ6UB35 978 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 IFNLR1Q8IU57 520 aaPredicted RBP18.02■□□□□ 0.48
LSM12-204ENST00000591247 KATNAL2Q8IYT4 538 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 TMEM35BQ8NCS4 154 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 DCLK3Q9C098 648 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 PCDHGC3Q9UN70 934 aa18.02■□□□□ 0.48
LSM12-204ENST00000591247 IQCA1LA6NCM1 817 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 ARF4P18085 180 aaPredicted RBP18.01■□□□□ 0.47
LSM12-204ENST00000591247 CDH5P33151 784 aaPredicted RBP18.01■□□□□ 0.47
LSM12-204ENST00000591247 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
LSM12-204ENST00000591247 KRT17Q04695 432 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 PPP1R7Q15435 360 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 WDR72Q3MJ13 1102 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 DENND1BQ6P3S1 775 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 MCEEQ96PE7 176 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 FAM118BQ9BPY3 351 aa18.01■□□□□ 0.47
LSM12-204ENST00000591247 PABPC3Q9H361 631 aaKnown RBP18.01■□□□□ 0.47
LSM12-204ENST00000591247 KLHL11Q9NVR0 708 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms