RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 MYO16Q9Y6X6 1858 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 STAU1O95793 577 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 ACAT1P24752 427 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 OR1D2P34982 312 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 CDR1P51861 262 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 TSPY1Q01534 308 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 MIIPQ5JXC2 388 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 C2orf16Q68DN1 1984 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 MRPL43Q8N983 215 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
DDX39A-213ENST00000590315 FBXL5Q9UKA1 691 aa13.77□□□□□ -0.21
DDX39A-213ENST00000590315 A8MXQ7 604 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 TEX28O15482 410 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 EFEMP2O95967 443 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 CYP11A1P05108 521 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 PDGFRBP09619 1106 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 OR4Q2P0C623 313 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 SRGAP2BP0DMP2 458 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 ZNF18P17022 549 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
DDX39A-213ENST00000590315 LHX1P48742 406 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 CDH8P55286 799 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 UBXN1Q04323 297 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 OSTM1Q86WC4 334 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 TATDN2Q93075 761 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 LSM14BQ9BX40 385 aaKnown RBP13.76□□□□□ -0.21
DDX39A-213ENST00000590315 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 VRTNQ9H8Y1 702 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
DDX39A-213ENST00000590315 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 CHD7Q9P2D1 2997 aa13.76□□□□□ -0.21
DDX39A-213ENST00000590315 OR6C75A6NL08 312 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 HCRTO43612 131 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 GLUD1P00367 558 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SLC9A1P19634 815 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 WARSP23381 471 aaKnown RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 TBXAS1P24557 533 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 PCSK1P29120 753 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.211e-8■■□□□ 14.1
DDX39A-213ENST00000590315 GNL1P36915 607 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 ASPAP45381 313 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
DDX39A-213ENST00000590315 FANCCQ00597 558 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 ORC1Q13415 861 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 CUL2Q13617 745 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 DUSP6Q16828 381 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 RRAGAQ7L523 313 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 PPFIBP1Q86W92 1011 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 ARHGEF19Q8IW93 802 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 PGLYRP2Q96PD5 576 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 TMEM209Q96SK2 561 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 ARID3AQ99856 593 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SYT15Q9BQS2 421 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 DNAI2Q9GZS0 605 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 SDCBP2Q9H190 292 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 BACE2Q9Y5Z0 518 aa13.75□□□□□ -0.21
DDX39A-213ENST00000590315 GTPBP10A4D1E9 387 aaKnown RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 PMM2O15305 246 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ADAM12O43184 909 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 OAZ2O95190 189 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ELF1P32519 619 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ROR1Q01973 937 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 HYAL1Q12794 435 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ARHGAP44Q17R89 818 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ZNF394Q53GI3 561 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 KBTBD7Q8WVZ9 684 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 CDCA3Q99618 268 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 CYP3A43Q9HB55 503 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 RXFP1Q9HBX9 757 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-213ENST00000590315 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
DDX39A-213ENST00000590315 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms