RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PAAF1Q9BRP4 392 aa18.59■□□□□ 0.57
CXXC1-212ENST00000589940 TTC3P53804 2025 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 HOXA2O43364 376 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 KIF5CO60282 957 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 TRIM72Q6ZMU5 477 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 DPH6Q7L8W6 267 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 C3orf58Q8NDZ4 430 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 NT5C1AQ9BXI3 368 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 ISCUQ9H1K1 167 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 TBC1D13Q9NVG8 400 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 L1RE1Q9UN81 338 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 DUSP10Q9Y6W6 482 aa18.58■□□□□ 0.57
CXXC1-212ENST00000589940 TDRD15B5MCY1 1934 aaKnown RBP18.58■□□□□ 0.57
CXXC1-212ENST00000589940 BRD2P25440 801 aaKnown RBP18.58■□□□□ 0.56
CXXC1-212ENST00000589940 ETF1P62495 437 aaKnown RBP18.58■□□□□ 0.56
CXXC1-212ENST00000589940 DSC1Q08554 894 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 CLEC16AQ2KHT3 1053 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 MFSD5Q6N075 450 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 UNC93AQ86WB7 457 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 DNAAF5Q86Y56 855 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 NPAS4Q8IUM7 802 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 ZSWIM1Q9BR11 485 aa18.58■□□□□ 0.56
CXXC1-212ENST00000589940 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
CXXC1-212ENST00000589940 CYB561D2O14569 222 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 RTN2O75298 545 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 CD19P15391 556 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 IGFBP6P24592 240 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 AARSP49588 968 aaKnown RBP eCLIP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 GALCP54803 685 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 ORC1Q13415 861 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 DNTTIP2Q5QJE6 756 aaKnown RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 TMEM199Q8N511 208 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 TFAP2BQ92481 460 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 MYO1AQ9UBC5 1043 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 B3GAT3O94766 335 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 FTLP02792 175 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 CYP1A1P04798 512 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 FAM163BP0C2L3 166 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 UNGP13051 313 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 CSF2RAP15509 400 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 PAX3P23760 479 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 GNG11P61952 73 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
CXXC1-212ENST00000589940 ZNF280BQ86YH2 543 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 ADGRF2Q8IZF7 708 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 PDCL2Q8N4E4 241 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 OR6B3Q8NGW1 331 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 RSPH1Q8WYR4 309 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 SENP8Q96LD8 212 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 CASD1Q96PB1 797 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 KIAA1257Q9ULG3 409 aa18.57■□□□□ 0.56
CXXC1-212ENST00000589940 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 ANKRD62A6NC57 917 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 MED7O43513 233 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 DDHD2O94830 711 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 CFHP08603 1231 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 SECISBP2LQ93073 1101 aaKnown RBP18.56■□□□□ 0.56
CXXC1-212ENST00000589940 PCDHGC3Q9UN70 934 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 MICAL3Q7RTP6 2002 aa18.56■□□□□ 0.56
CXXC1-212ENST00000589940 ABHD14A-ACY1A0A1B0GW23 586 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 B4GALT3O60512 393 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 TMEM253P0C7T8 217 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 VDRP11473 427 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 WARSP23381 471 aaKnown RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 GNL1P36915 607 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 ACAD10Q6JQN1 1059 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 COLGALT2Q8IYK4 626 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 CTNNBL1Q8WYA6 563 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 CYFIP2Q96F07 1278 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 HEXIM2Q96MH2 286 aaKnown RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 FAM193BQ96PV7 902 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 SNX25Q9H3E2 840 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 A8MXQ7 604 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 LSM8O95777 96 aaKnown RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 PFKMP08237 780 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 CENPCQ03188 943 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 DSTYKQ6XUX3 929 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 SYT10Q6XYQ8 523 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 TMEM86AQ8N2M4 240 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 RNF10Q8N5U6 811 aaKnown RBP18.55■□□□□ 0.56
CXXC1-212ENST00000589940 SALL4Q9UJQ4 1053 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 STXBP5LQ9Y2K9 1186 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 PAXBP1Q9Y5B6 917 aa18.55■□□□□ 0.56
CXXC1-212ENST00000589940 ABCB4P21439 1286 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-212ENST00000589940 NSFP46459 744 aaKnown RBP18.54■□□□□ 0.56
CXXC1-212ENST00000589940 GATMP50440 423 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 NOMO3P69849 1222 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 TIGD5Q53EQ6 642 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 SGO2Q562F6 1265 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 ZNF569Q5MCW4 686 aa18.54■□□□□ 0.56
CXXC1-212ENST00000589940 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms