RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 YY1P25490 414 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 NUP93Q8N1F7 819 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 DHX35Q9H5Z1 703 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 TASP1Q9H6P5 420 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 DDX18Q9NVP1 670 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 NAALADL1Q9UQQ1 740 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 F8W8V4 182 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 GLRA3O75311 464 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 RASSF9O75901 435 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 PSMG1O95456 288 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 ERFEQ4G0M1 354 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 DCAF15Q66K64 600 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 EP400NLQ6ZTU2 488 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 OR6B3Q8NGW1 331 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 KRT35Q92764 455 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 LXNQ9BS40 222 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 PCDHB2Q9Y5E7 798 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 ATP6V1C1P21283 382 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 TNFAIP2Q03169 654 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 TMC5Q6UXY8 1006 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 PID1Q7Z2X4 250 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 NEDD1Q8NHV4 660 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 SNX19Q92543 992 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 ULK4Q96C45 1275 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 ATXN7L3BQ96GX2 97 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 TLR10Q9BXR5 811 aa15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 PAIP1Q9H074 479 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-214ENST00000589677 KANSL1LA0AUZ9 987 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 DGKIO75912 1065 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 MLH1P40692 756 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 AQP5P55064 265 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 SNRPFP62306 86 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 TBL3Q12788 808 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 MTMR1Q13613 665 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 TSTA3Q13630 321 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 RWDD4Q6NW29 188 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 CLEC4GQ6UXB4 293 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 PRCCQ92733 491 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 EPS8L2Q9H6S3 715 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 RSAD1Q9HA92 442 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 DCDC2Q9UHG0 476 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 PSMD3O43242 534 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 SLC4A1P02730 911 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 C21orf59P57076 290 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 TSPAN17Q96FV3 270 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 PACSIN1Q9BY11 444 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 NDEL1Q9GZM8 345 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 SNX3O60493 162 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 KCNA2P16389 499 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 HADHAP40939 763 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 EFHC2Q5JST6 749 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 RNF135Q8IUD6 432 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 TULP4Q9NRJ4 1543 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 NFX1Q12986 1120 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 NBPF15Q8N660 670 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 ABCF3Q9NUQ8 709 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 DAPK2Q9UIK4 370 aa15.26■□□□□ 0.03
SMARCA4-214ENST00000589677 MROH7Q68CQ1 1323 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 UNC5CO95185 931 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 PON1P27169 355 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 RAB14P61106 215 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 MEA1Q16626 185 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 THEMIS2Q5TEJ8 643 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 TRIM69Q86WT6 500 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 THNSL1Q8IYQ7 743 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 TMEM237Q96Q45 408 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 CEP152O94986 1710 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 WFS1O76024 890 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 RXRBP28702 533 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 USP10Q14694 798 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 MTFR1Q15390 333 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 RNF43Q68DV7 783 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 BCL10O95999 233 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 MYBP10242 640 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 KCNA1Q09470 495 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 SLC27A3Q5K4L6 730 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 RBAKQ9NYW8 714 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 SOX13Q9UN79 622 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 SNX13Q9Y5W8 968 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 ZSCAN5CA6NGD5 496 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 PSMC5P62195 406 aa15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 OTUD4Q01804 1114 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-214ENST00000589677 DEPDC1Q5TB30 811 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms