RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 LRRC1Q9BTT6 524 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 BCO2Q9BYV7 579 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 TRIM6Q9C030 488 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 DPP3Q9NY33 737 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 SNTG2Q9NY99 539 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ANAPC7Q9UJX3 599 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 AGAP1Q9UPQ3 857 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 PIN4Q9Y237 131 aaKnown RBP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 DERAQ9Y315 318 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 C2CD2Q9Y426 696 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ALG6Q9Y672 507 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 COL6A3P12111 3177 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 H0YGN5 161 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 M0QZ92 97 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 HRO43593 1189 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 ZMYND10O75800 440 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 ZRANB2O95218 330 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 LSM8O95777 96 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CD19P15391 556 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 EIF4BP23588 611 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 HOXC8P31273 242 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CRYBB1P53674 252 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CDH8P55286 799 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 MRPS25P82663 173 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 MRPS6P82932 125 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CACNB2Q08289 660 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 LONRF2Q1L5Z9 754 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 WDR72Q3MJ13 1102 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 FAM47CQ5HY64 1035 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 DCAF12L1Q5VU92 463 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CXCL17Q6UXB2 119 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CPNE8Q86YQ8 564 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 KLHL7Q8IXQ5 586 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 RASGEF1CQ8N431 466 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CXorf38Q8TB03 319 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 HNRNPLLQ8WVV9 542 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF606Q8WXB4 792 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 RUBCNQ92622 972 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 RPS6KC1Q96S38 1066 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 KRT12Q99456 494 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 ZSWIM1Q9BR11 485 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 AP1M1Q9BXS5 423 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 WNT8AQ9H1J5 351 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 NXF3Q9H4D5 531 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 PLEKHA5Q9HAU0 1116 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CYP3A43Q9HB55 503 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 HES2Q9Y543 173 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 CEP83Q9Y592 693 aa9.32□□□□□ -0.92
SMAD4-206ENST00000588860 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
SMAD4-206ENST00000588860 KRIT1O00522 736 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 SEPT4O43236 478 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 MED7O43513 233 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 RECQL4O94761 1208 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CALB1P05937 261 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 PAEPP09466 180 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 ELNP15502 786 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 EN2P19622 333 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CTNNA2P26232 953 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 MARCKSL1P49006 195 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 RAD23BP54727 409 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 SLC7A5Q01650 507 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 SP3Q02447 781 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 ORC1Q13415 861 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 MAP9Q49MG5 647 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 GLE1Q53GS7 698 aaKnown RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 C2CD6Q53TS8 623 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 BEND6Q5SZJ8 279 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 SEL1L2Q5TEA6 688 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TAF2Q6P1X5 1199 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 DENND1BQ6P3S1 775 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 GSPT2Q8IYD1 628 aaKnown RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TMEM35BQ8NCS4 154 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 BEST2Q8NFU1 509 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 HDAC7Q8WUI4 952 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TFAP2BQ92481 460 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 ALG3Q92685 438 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 KRT35Q92764 455 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 FAXDC2Q96IV6 333 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 VCPIP1Q96JH7 1222 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CELF4Q9BZC1 486 aaKnown RBP9.31□□□□□ -0.92
SMAD4-206ENST00000588860 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CARD9Q9H257 536 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CXCL16Q9H2A7 254 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 VRTNQ9H8Y1 702 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 XPNPEP3Q9NQH7 507 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms