RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 TTC9BQ8N6N2 239 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 OR10T2Q8NGX3 314 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 MSANTD3Q96H12 275 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 EPSTI1Q96J88 318 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 ATXN3LQ9H3M9 355 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
ERCC1-206ENST00000588300 ARNTLO00327 626 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 DPYSL4O14531 572 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 CHADO15335 359 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SOAT2O75908 522 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 PDCP20941 246 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 GABRR2P28476 465 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 TUFMP49411 452 aaKnown RBP17.22■□□□□ 0.35
ERCC1-206ENST00000588300 FCHO2Q0JRZ9 810 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 VEPH1Q14D04 833 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SLC39A12Q504Y0 691 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 GAREM2Q75VX8 874 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 ZNF720Q7Z2F6 126 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-206ENST00000588300 THEM5Q8N1Q8 247 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 FAM200AQ8TCP9 573 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 POMGNT1Q8WZA1 660 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SECISBP2LQ93073 1101 aaKnown RBP17.22■□□□□ 0.35
ERCC1-206ENST00000588300 RSPRY1Q96DX4 576 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SEPT5Q99719 369 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-206ENST00000588300 ZCWPW1Q9H0M4 648 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 LMAN1LQ9HAT1 526 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
ERCC1-206ENST00000588300 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 FRYLO94915 3013 aa17.22■□□□□ 0.35
ERCC1-206ENST00000588300 DMXL1Q9Y485 3027 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 CYB561D2O14569 222 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 CCNE1P24864 410 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 TXLNAP40222 546 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 CCR3P51677 355 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 NRLP54845 237 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 PUM1Q14671 1186 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC1-206ENST00000588300 POSTNQ15063 836 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 MGAT5BQ3V5L5 792 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
ERCC1-206ENST00000588300 C2orf15Q8WU43 125 aaKnown RBP17.21■□□□□ 0.35
ERCC1-206ENST00000588300 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
ERCC1-206ENST00000588300 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 C8orf33Q9H7E9 229 aaPredicted RBP17.21■□□□□ 0.35
ERCC1-206ENST00000588300 OBP2AQ9NY56 170 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 CLIC4Q9Y696 253 aa17.21■□□□□ 0.35
ERCC1-206ENST00000588300 PPP1R37O75864 691 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 IL18RAPO95256 599 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 KPNA1P52294 538 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-206ENST00000588300 SMARCB1Q12824 385 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 CUL4AQ13619 759 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 LRRC32Q14392 662 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 PTPAQ15257 358 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 TAF12Q16514 161 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 SV2CQ496J9 727 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 ARHGAP29Q52LW3 1261 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 DGLUCYQ7Z3D6 616 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 SPPL2BQ8TCT7 592 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 ZNF560Q96MR9 790 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 LPIN3Q9BQK8 851 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 MRPL44Q9H9J2 332 aaKnown RBP17.2■□□□□ 0.34
ERCC1-206ENST00000588300 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-206ENST00000588300 EXOC7Q9UPT5 735 aa17.2■□□□□ 0.34
ERCC1-206ENST00000588300 SRPRBQ9Y5M8 271 aaKnown RBP17.2■□□□□ 0.34
ERCC1-206ENST00000588300 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 KPNA7A9QM74 516 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 CHRNB1P11230 501 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 TDGF1P13385 188 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 GAP43P17677 238 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 ATF6P18850 670 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 WEE1P30291 646 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 CDC25CP30307 473 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 ADSSP30520 456 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 RRAGBQ5VZM2 374 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 WSCD1Q658N2 575 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
ERCC1-206ENST00000588300 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 GPIHBP1Q8IV16 184 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 STRA6Q9BX79 667 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 IKZF4Q9H2S9 585 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 TASP1Q9H6P5 420 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 GPR179Q6PRD1 2367 aa17.19■□□□□ 0.34
ERCC1-206ENST00000588300 MYMKA6NI61 221 aa17.18■□□□□ 0.34
ERCC1-206ENST00000588300 PNPLA4P41247 253 aa17.18■□□□□ 0.34
ERCC1-206ENST00000588300 CXCL12P48061 93 aa17.18■□□□□ 0.34
ERCC1-206ENST00000588300 SOX9P48436 509 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms