RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ELMOD1Q8N336 334 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 TDRD5Q8NAT2 981 aaKnown RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 SYAP1Q96A49 352 aaPredicted RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 ZCWPW1Q9H0M4 648 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 ZFP37Q9Y6Q3 630 aaPredicted RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 ANK1P16157 1881 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 CLUHO75153 1309 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 LRRIQ3A6PVS8 624 aaPredicted RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 GABRDO14764 452 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 STX10O60499 249 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 AKAP3O75969 853 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 SEC24AO95486 1093 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 C4BPAP04003 597 aaKnown RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 PTPN2P17706 415 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 CCNE1P24864 410 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 PCSK1P29120 753 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 TUFMP49411 452 aaKnown RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 MYL7Q01449 175 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 TSPY1Q01534 308 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 BIRC3Q13489 604 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 MORC3Q14149 939 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 SOWAHAQ2M3V2 549 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 SGSM1Q2NKQ1 1148 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 LIMS2Q7Z4I7 341 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 TAF4BQ92750 862 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 ERCC4Q92889 916 aaPredicted RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 ZNF512Q96ME7 567 aaPredicted RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 C1QTNF1Q9BXJ1 281 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 GZF1Q9H116 711 aaPredicted RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 VRTNQ9H8Y1 702 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 AVENQ9NQS1 362 aaPredicted RBP10.85□□□□□ -0.67
TPM4-207ENST00000588032 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 CDH22Q9UJ99 828 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 INSL5Q9Y5Q6 135 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
TPM4-207ENST00000588032 MTCL1Q9Y4B5 1905 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 BICDL2A1A5D9 508 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 C2CD4DB7Z1M9 353 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 CCL16O15467 120 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 DCXO43602 365 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 TACC1O75410 805 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 MICAL2O94851 1124 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 OR4Q2P0C623 313 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 EPB41P11171 864 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 FSHRP23945 695 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 GTF2H1P32780 548 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 TNNC1P63316 161 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 DUSP4Q13115 394 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 NFE2Q16621 373 aaPredicted RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 WDR72Q3MJ13 1102 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 ZACNQ401N2 412 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 TDRD10Q5VZ19 366 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 ANKRD40Q6AI12 368 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 GRASPQ7Z6J2 395 aaPredicted RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 SPPL2BQ8TCT7 592 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 PLEKHO2Q8TD55 490 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 NXPE3Q969Y0 559 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 RTP3Q9BQQ7 232 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
TPM4-207ENST00000588032 L1RE1Q9UN81 338 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 ASB3Q9Y575 518 aa10.84□□□□□ -0.67
TPM4-207ENST00000588032 MTMR11A4FU01 709 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 ZNF197O14709 1029 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 SLC16A3O15427 465 aaKnown RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 P4HA1P13674 534 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 WARSP23381 471 aaKnown RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 GBP2P32456 591 aaPredicted RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 GNL1P36915 607 aaPredicted RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 EPHB3P54753 998 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 MYL6P60660 151 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 DLG4P78352 724 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 TWF1Q12792 350 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 NCOA4Q13772 614 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 CAMK4Q16566 473 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 PABPC1LQ4VXU2 614 aaKnown RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 SLC39A12Q504Y0 691 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 ZNF667Q5HYK9 610 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 CYP4A22Q5TCH4 519 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 SCARA3Q6AZY7 606 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 ISM2Q6H9L7 571 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 LRRTM3Q86VH5 581 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 ATAD1Q8NBU5 361 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms