RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 FAM3CQ92520 227 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 BICD1Q96G01 975 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.32
NCLN-203ENST00000587740 SEMA4GQ9NTN9 838 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 TBX20Q9UMR3 447 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 PCDHB13Q9Y5F0 798 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
NCLN-203ENST00000587740 SMIM28A0A1B0GU29 152 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 PRRG1O14668 218 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 GDF9O60383 454 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 MICAL2O94851 1124 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 GDI1P31150 447 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 VIPR2P41587 438 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 CCR3P51677 355 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
NCLN-203ENST00000587740 ALCAMQ13740 583 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 ZC2HC1CQ53FD0 456 aaPredicted RBP17.01■□□□□ 0.31
NCLN-203ENST00000587740 WDR44Q5JSH3 913 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 ZPBP2Q6X784 338 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 PRR23BQ6ZRT6 265 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 TCEAL8Q8IYN2 117 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 CEP120Q8N960 986 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 IRF7Q92985 503 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 UROC1Q96N76 676 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 TRPV5Q9NQA5 729 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 INSL5Q9Y5Q6 135 aa17.01■□□□□ 0.31
NCLN-203ENST00000587740 ARNTLO00327 626 aa17■□□□□ 0.31
NCLN-203ENST00000587740 TRAPPC3O43617 180 aa17■□□□□ 0.31
NCLN-203ENST00000587740 LRP3O75074 770 aa17■□□□□ 0.31
NCLN-203ENST00000587740 GJA1P17302 382 aa17■□□□□ 0.31
NCLN-203ENST00000587740 PSMC3P17980 439 aa17■□□□□ 0.31
NCLN-203ENST00000587740 CCNE1P24864 410 aa17■□□□□ 0.31
NCLN-203ENST00000587740 HOXC13P31276 330 aa17■□□□□ 0.31
NCLN-203ENST00000587740 ELF1P32519 619 aa17■□□□□ 0.31
NCLN-203ENST00000587740 LIG4P49917 911 aa17■□□□□ 0.31
NCLN-203ENST00000587740 ARPP19P56211 112 aa17■□□□□ 0.31
NCLN-203ENST00000587740 MRPL58Q14197 206 aaKnown RBP17■□□□□ 0.31
NCLN-203ENST00000587740 XKR4Q5GH76 650 aa17■□□□□ 0.31
NCLN-203ENST00000587740 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
NCLN-203ENST00000587740 ALKAL1Q6UXT8 129 aa17■□□□□ 0.31
NCLN-203ENST00000587740 PRR23CQ6ZRP0 262 aa17■□□□□ 0.31
NCLN-203ENST00000587740 STXBP4Q6ZWJ1 553 aa17■□□□□ 0.31
NCLN-203ENST00000587740 SMARCD2Q92925 531 aa17■□□□□ 0.31
NCLN-203ENST00000587740 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
NCLN-203ENST00000587740 TIGD1Q96MW7 591 aa17■□□□□ 0.31
NCLN-203ENST00000587740 ZMAT2Q96NC0 199 aaKnown RBP17■□□□□ 0.31
NCLN-203ENST00000587740 TCHPQ9BT92 498 aa17■□□□□ 0.31
NCLN-203ENST00000587740 IER2Q9BTL4 223 aa17■□□□□ 0.31
NCLN-203ENST00000587740 CYP4F11Q9HBI6 524 aa17■□□□□ 0.31
NCLN-203ENST00000587740 CEP72Q9P209 647 aa17■□□□□ 0.31
NCLN-203ENST00000587740 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
NCLN-203ENST00000587740 FBXL5Q9UKA1 691 aa17■□□□□ 0.31
NCLN-203ENST00000587740 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 ZNF197O14709 1029 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 HNRNPDLO14979 420 aaKnown RBP16.99■□□□□ 0.31
NCLN-203ENST00000587740 TOM1L1O75674 476 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 MATR3P43243 847 aaKnown RBP eCLIP16.99■□□□□ 0.31
NCLN-203ENST00000587740 CXCL12P48061 93 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 FNTBP49356 437 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 SIM2Q14190 667 aaPredicted RBP16.99■□□□□ 0.31
NCLN-203ENST00000587740 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
NCLN-203ENST00000587740 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 PDZD4Q76G19 769 aaPredicted RBP16.99■□□□□ 0.31
NCLN-203ENST00000587740 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 ACCSQ96QU6 501 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 STRA6Q9BX79 667 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 RBM12Q9NTZ6 932 aaKnown RBP16.99■□□□□ 0.31
NCLN-203ENST00000587740 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 C2orf42Q9NWW7 574 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
NCLN-203ENST00000587740 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 K7ESF4 209 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PODXLO00592 558 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 CLDN3O15551 220 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 KLRC4O43908 158 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PPP1R37O75864 691 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PIGRP01833 764 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
NCLN-203ENST00000587740 PROZP22891 400 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 CASP5P51878 434 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 EHHADHQ08426 723 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PPP2R5DQ14738 602 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 POSTNQ15063 836 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 CSRP2Q16527 193 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 MFSD6LQ8IWD5 586 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 DEPDC1BQ8WUY9 529 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 RSPRY1Q96DX4 576 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
NCLN-203ENST00000587740 TRPV4Q9HBA0 871 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 ANKFY1Q9P2R3 1169 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 PDCD11Q14690 1871 aaKnown RBP16.98■□□□□ 0.31
NCLN-203ENST00000587740 FRYQ5TBA9 3013 aa16.98■□□□□ 0.31
NCLN-203ENST00000587740 HEPACAM2A8MVW5 462 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms