RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 DNPEPQ9ULA0 475 aa17.36■□□□□ 0.37
RANBP3-209ENST00000587411 SCINQ9Y6U3 715 aa17.36■□□□□ 0.37
RANBP3-209ENST00000587411 LTBP1Q14766 1721 aa17.36■□□□□ 0.37
RANBP3-209ENST00000587411 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 TJP3O95049 919 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 TGDSO95455 350 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 CRKP46108 304 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 TCP10Q12799 353 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 RNASEH2BQ5TBB1 312 aaKnown RBP17.35■□□□□ 0.37
RANBP3-209ENST00000587411 RNF220Q5VTB9 566 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 TRIM72Q6ZMU5 477 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 BICD1Q96G01 975 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 FGD4Q96M96 766 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 MFSD14AQ96MC6 490 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 MANSC1Q9H8J5 431 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 NUMBLQ9Y6R0 609 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 SLC16A4O15374 487 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 GDF11O95390 407 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 ARFIP2P53365 341 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 CDK16Q00536 496 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 PDIA2Q13087 525 aaKnown RBP17.35■□□□□ 0.37
RANBP3-209ENST00000587411 NBPF20Q3BBV1 942 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 SV2AQ7L0J3 742 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 PTF1AQ7RTS3 328 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 ZNF276Q8N554 614 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 SKA1Q96BD8 255 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 ZC3H12CQ9C0D7 883 aaKnown RBP17.35■□□□□ 0.37
RANBP3-209ENST00000587411 C1orf112Q9NSG2 853 aa17.35■□□□□ 0.37
RANBP3-209ENST00000587411 MRPL11Q9Y3B7 192 aaKnown RBP17.35■□□□□ 0.37
RANBP3-209ENST00000587411 A0A0G2JND7 137 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 TBX10O75333 385 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 LYPLA2O95372 231 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 CACNA2D1P54289 1103 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ZBTB16Q05516 673 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 MCL1Q07820 350 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 KLHL38Q2WGJ6 581 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 DAB2IPQ5VWQ8 1189 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 FAM91A1Q658Y4 838 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 PHLDB2Q86SQ0 1253 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 GLIS1Q8NBF1 620 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 GATA6Q92908 595 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 NR1H4Q96RI1 486 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 MXRA8Q9BRK3 442 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 KCNG1Q9UIX4 513 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ZNFX1Q9P2E3 1918 aaKnown RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 PEX3P56589 373 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ADGRD1Q6QNK2 874 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 CAPN12Q6ZSI9 719 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 PCGF5Q86SE9 256 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ATP11CQ8NB49 1132 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ZNF184Q99676 751 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 DHRS4Q9BTZ2 278 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 CCDC28BQ9BUN5 200 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 TSSK1BQ9BXA7 367 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 PCDH9Q9HC56 1237 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 RABGEF1Q9UJ41 708 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ZSCAN5DPP0CG00 497 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ESRRAP11474 423 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 GJC1P36383 396 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 DYNC1I2Q13409 638 aaKnown RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 MAMLD1Q13495 774 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 HP1BP3Q5SSJ5 553 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 MAP4K3Q8IVH8 894 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 MRRFQ96E11 262 aaKnown RBP17.34■□□□□ 0.37
RANBP3-209ENST00000587411 ANGPTL2Q9UKU9 493 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 TBX20Q9UMR3 447 aa17.34■□□□□ 0.37
RANBP3-209ENST00000587411 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.37
RANBP3-209ENST00000587411 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 PIK3CAP42336 1068 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 VCPP55072 806 aaKnown RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 CYP24A1Q07973 514 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 OVGP1Q12889 678 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 HIF1AQ16665 826 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 SLC5A9Q2M3M2 681 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 PLEKHA7Q6IQ23 1121 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 LLGL2Q6P1M3 1020 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 CHSY1Q86X52 802 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 BANPQ8N9N5 519 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 TCP10LQ8TDR4 215 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 SLITRK1Q96PX8 696 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 USTQ9Y2C2 406 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 CALCAP01258 141 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 IL1BP01584 269 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 QARSP47897 775 aaKnown RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 GPX6P59796 221 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms