RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MSANTD3Q96H12 275 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 MKNK1Q9BUB5 465 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 ASB7Q9H672 318 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 DLL3Q9NYJ7 618 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 C2CD2Q9Y426 696 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 CHADO15335 359 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 CHRNB1P11230 501 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 CCR3P51677 355 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 PPP2R5DQ14738 602 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 ADALQ6DHV7 355 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 ITIH5Q86UX2 942 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 ARID3BQ8IVW6 561 aaPredicted RBP20.95■□□□□ 0.94
TRAF4-216ENST00000586813 SECISBP2LQ93073 1101 aaKnown RBP20.95■□□□□ 0.94
TRAF4-216ENST00000586813 CCSER1Q9C0I3 900 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 ST6GALNAC4Q9H4F1 302 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
TRAF4-216ENST00000586813 DSEQ9UL01 958 aa20.95■□□□□ 0.94
TRAF4-216ENST00000586813 MED19A0JLT2 244 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 SLC38A8A6NNN8 435 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 FGF19O95750 216 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 GABRR2P28476 465 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 NRLP54845 237 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 SLC39A12Q504Y0 691 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 SLFN12LQ6IEE8 588 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 C1orf228Q6PIY5 440 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 GPIHBP1Q8IV16 184 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 GPR161Q8N6U8 529 aaKnown RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 KRI1Q8N9T8 703 aaKnown RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 SEPT5Q99719 369 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 LPIN3Q9BQK8 851 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 ZCWPW1Q9H0M4 648 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 ATXN3LQ9H3M9 355 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 AGO2Q9UKV8 859 aaKnown RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 STYXL1Q9Y6J8 313 aa20.94■□□□□ 0.94
TRAF4-216ENST00000586813 ZNF638Q14966 1978 aaKnown RBP20.94■□□□□ 0.94
TRAF4-216ENST00000586813 ATF6P18850 670 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 DDIT3P35638 169 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 SOX9P48436 509 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 TAF6P49848 677 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 KPNA1P52294 538 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-216ENST00000586813 RSPO4Q2I0M5 234 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-216ENST00000586813 GPR158Q5T848 1215 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 FAM200AQ8TCP9 573 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 LRRC3BQ96PB8 259 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 PYM1Q9BRP8 204 aaKnown RBP20.93■□□□□ 0.94
TRAF4-216ENST00000586813 IKZF4Q9H2S9 585 aa20.93■□□□□ 0.94
TRAF4-216ENST00000586813 C8orf33Q9H7E9 229 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-216ENST00000586813 CYB561D2O14569 222 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 TUFMP49411 452 aaKnown RBP20.92■□□□□ 0.94
TRAF4-216ENST00000586813 CDR1P51861 262 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 POU5F1Q01860 360 aaKnown RBP20.92■□□□□ 0.94
TRAF4-216ENST00000586813 LRRC32Q14392 662 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 GAS6Q14393 721 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 VEPH1Q14D04 833 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 MGAT5BQ3V5L5 792 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 ARHGAP15Q53QZ3 475 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 USP49Q70CQ1 688 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 METTL23Q86XA0 190 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 SFR1Q86XK3 245 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 EFCAB13Q8IY85 973 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 HVCN1Q96D96 273 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 EPSTI1Q96J88 318 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 DPP3Q9NY33 737 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
TRAF4-216ENST00000586813 MYBPHLA2RUH7 354 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 SPECC1L-ADORA2AF8WAN1 911 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 DPYSL4O14531 572 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 PPP1R37O75864 691 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 PRAMEF12O95522 483 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 CTHP32929 405 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 CXCL12P48061 93 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 CYP4F8P98187 520 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 SATB1Q01826 763 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 ARHGAP29Q52LW3 1261 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 CRELD2Q6UXH1 353 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-216ENST00000586813 DYMQ7RTS9 669 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 ZNF720Q7Z2F6 126 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 THEM5Q8N1Q8 247 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 POMGNT1Q8WZA1 660 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 ZFYVE19Q96K21 471 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 TASP1Q9H6P5 420 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 IL21Q9HBE4 155 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 RBM12Q9NTZ6 932 aaKnown RBP20.91■□□□□ 0.94
TRAF4-216ENST00000586813 STK17AQ9UEE5 414 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 GMEB2Q9UKD1 530 aa20.91■□□□□ 0.94
TRAF4-216ENST00000586813 VPS37CA5D8V6 355 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-216ENST00000586813 WEE1P30291 646 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 CDC25CP30307 473 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 ADSSP30520 456 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 PTPAQ15257 358 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 WDR44Q5JSH3 913 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 WSCD1Q658N2 575 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 TXNDC11Q6PKC3 985 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 RALGPS2Q86X27 583 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-216ENST00000586813 SPEM1Q8N4L4 309 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 SPPL2BQ8TCT7 592 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 C2orf15Q8WU43 125 aaKnown RBP20.9■□□□□ 0.94
TRAF4-216ENST00000586813 GCNAQ96QF7 691 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 GTSE1Q9NYZ3 720 aa20.9■□□□□ 0.94
TRAF4-216ENST00000586813 CLIC4Q9Y696 253 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms