RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 DGKKQ5KSL6 1271 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 GPR158Q5T848 1215 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 DSTYKQ6XUX3 929 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 FIZ1Q96SL8 496 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 ATXN3LQ9H3M9 355 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 OBP2AQ9NY56 170 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 A0A0B4J269 797 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 PIRO00625 290 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 CYP11A1P05108 521 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 ALDH1A3P47895 512 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 PXNP49023 591 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-225ENST00000586385 SMTNP53814 917 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
BRCA1-225ENST00000586385 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
BRCA1-225ENST00000586385 CCDC6Q16204 474 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 ST3GAL2Q16842 350 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 C9orf57Q5W0N0 161 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 FSTL4Q6MZW2 842 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 USP37Q86T82 979 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 FAM83CQ9BQN1 747 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 ZCWPW1Q9H0M4 648 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
BRCA1-225ENST00000586385 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
BRCA1-225ENST00000586385 CNOT1A5YKK6 2376 aaKnown RBP12.89□□□□□ -0.35
BRCA1-225ENST00000586385 SDK1Q7Z5N4 2213 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 TISP43B9A030 160 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 OGTO15294 1046 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-225ENST00000586385 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 BPIFB1Q8TDL5 484 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 FBRSL1Q9HCM7 1045 aaKnown RBP12.89□□□□□ -0.35
BRCA1-225ENST00000586385 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 TBX20Q9UMR3 447 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
BRCA1-225ENST00000586385 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 AXIN1O15169 862 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 PMLP29590 882 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 LIG4P49917 911 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 ZNF131P52739 623 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 SLC39A12Q504Y0 691 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 SCARA3Q6AZY7 606 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 CEP68Q76N32 757 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 KBTBD6Q86V97 674 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 STKLD1Q8NE28 680 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 GIPC2Q8TF65 315 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 BICD1Q96G01 975 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 SMOC1Q9H4F8 434 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
BRCA1-225ENST00000586385 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 TMLHEQ9NVH6 421 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 TSC2P49815 1807 aa12.88□□□□□ -0.35
BRCA1-225ENST00000586385 KIF26AQ9ULI4 1882 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 DPYSL4O14531 572 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 HNRNPDLO14979 420 aaKnown RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 EPN2O95208 641 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 FGF19O95750 216 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 F11P03951 625 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 ODC1P11926 461 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 ARSAP15289 507 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 GPR15P49685 360 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 MCM2P49736 904 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 LIMK1P53667 647 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 WNT7BP56706 349 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms