RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CTHP32929 405 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 FNTBP49356 437 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
SDF2-202ENST00000585428 GTF2BQ00403 316 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 LRRC32Q14392 662 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 ARHGAP29Q52LW3 1261 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 C9orf57Q5W0N0 161 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 MYCT1Q8N699 235 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 OR10T2Q8NGX3 314 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 AK8Q96MA6 479 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 CNTNAP3BQ96NU0 1288 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 CNTNAP3Q9BZ76 1288 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 IL21Q9HBE4 155 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 BLOC1S4Q9NUP1 217 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 C2orf42Q9NWW7 574 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 GTSE1Q9NYZ3 720 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 DERAQ9Y315 318 aa15.69■□□□□ 0.1
SDF2-202ENST00000585428 COL4A2P08572 1712 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 F5P12259 2224 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 HNRNPDLO14979 420 aaKnown RBP15.68■□□□□ 0.1
SDF2-202ENST00000585428 TRAK2O60296 914 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ODC1P11926 461 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 GABRR2P28476 465 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 CCINQ13939 588 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 SIM2Q14190 667 aaPredicted RBP15.68■□□□□ 0.1
SDF2-202ENST00000585428 GPR158Q5T848 1215 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ITIH5Q86UX2 942 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 LRRTM3Q86VH5 581 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 LONP2Q86WA8 852 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 SYNPOQ8N3V7 929 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ZFYVE19Q96K21 471 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 SLC46A2Q9BY10 475 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ZCWPW1Q9H0M4 648 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ASB7Q9H672 318 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 TASP1Q9H6P5 420 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 SEMA4GQ9NTN9 838 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 KIF3AQ9Y496 699 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.68■□□□□ 0.1
SDF2-202ENST00000585428 STYXL1Q9Y6J8 313 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 CEP250Q9BV73 2442 aa15.68■□□□□ 0.1
SDF2-202ENST00000585428 ANKRD63C9JTQ0 380 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 DPYSL4O14531 572 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 NFICP08651 508 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 HOXC13P31276 330 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 POU5F1Q01860 360 aaKnown RBP15.67■□□□□ 0.1
SDF2-202ENST00000585428 SRSF5Q13243 272 aaKnown RBP15.67■□□□□ 0.1
SDF2-202ENST00000585428 CSRP2Q16527 193 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 PRR23BQ6ZRT6 265 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 Q6ZS52 159 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 GPBP1Q86WP2 473 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 TTC8Q8TAM2 541 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 BPIFB1Q8TDL5 484 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 PARVGQ9HBI0 331 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 DSEQ9UL01 958 aa15.67■□□□□ 0.1
SDF2-202ENST00000585428 SLC30A4O14863 429 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 PRAMEF12O95522 483 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 ATF6P18850 670 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 DDIT3P35638 169 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 UBA7P41226 1012 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 ACOT2P49753 483 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 PLCB2Q00722 1185 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 TNK2Q07912 1038 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 SMARCB1Q12824 385 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 MCM6Q14566 821 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 TMEM132DQ14C87 1099 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 PON2Q15165 354 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 SLC39A12Q504Y0 691 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 ARHGAP15Q53QZ3 475 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 TMEM150AQ86TG1 271 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 LPIN3Q9BQK8 851 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 FAM83CQ9BQN1 747 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 CCSER1Q9C0I3 900 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 ST6GALNAC4Q9H4F1 302 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 C2CD2Q9Y426 696 aa15.66■□□□□ 0.1
SDF2-202ENST00000585428 CITO14578 2027 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 K7ENM7 598 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 CYB561D2O14569 222 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 FAM13AO94988 1023 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 HAPLN1P10915 354 aaPredicted RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 CDC25CP30307 473 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 NMT1P30419 496 aaKnown RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 ABCD1P33897 745 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 DHX8Q14562 1220 aaKnown RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 ITPRIPL2Q3MIP1 535 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 MGAT5BQ3V5L5 792 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 SLFN12LQ6IEE8 588 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 CRELD2Q6UXH1 353 aaPredicted RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 WDR5BQ86VZ2 330 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 CMTM8Q8IZV2 173 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 CALML4Q96GE6 196 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 TMX3Q96JJ7 454 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 GKN1Q9NS71 199 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 THG1LQ9NWX6 298 aaKnown RBP15.65■□□□□ 0.1
SDF2-202ENST00000585428 DPP3Q9NY33 737 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms