RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ATAD1Q8NBU5 361 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 CCDC127Q96BQ5 260 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 AVENQ9NQS1 362 aaPredicted RBP21.99■■□□□ 1.11
SS18-224ENST00000584083 SIX4Q9UIU6 781 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 FBXL21Q9UKT6 434 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 NUMBLQ9Y6R0 609 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 MTMR11A4FU01 709 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 ZNF197O14709 1029 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 NARSO43776 548 aaKnown RBP21.98■■□□□ 1.11
SS18-224ENST00000584083 EXOC3O60645 756 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 PDGFBP01127 241 aaPredicted RBP21.98■■□□□ 1.11
SS18-224ENST00000584083 TNNI1P19237 187 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 ALDH1A3P47895 512 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CDR1P51861 262 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 EPHB3P54753 998 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CYP24A1Q07973 514 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 MYO1EQ12965 1108 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 PLD1Q13393 1074 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 SLC5A9Q2M3M2 681 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 MTSS1LQ765P7 747 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 PDZD4Q76G19 769 aaPredicted RBP21.98■■□□□ 1.11
SS18-224ENST00000584083 C12orf56Q8IXR9 622 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 HS6ST3Q8IZP7 471 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CXorf38Q8TB03 319 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 MCRS1Q96EZ8 462 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CCDC34Q96HJ3 373 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 RTP3Q9BQQ7 232 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 ZCWPW1Q9H0M4 648 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CRISPLD1Q9H336 500 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 MFSD1Q9H3U5 465 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 CEP72Q9P209 647 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 SNX9Q9Y5X1 595 aa21.98■■□□□ 1.11
SS18-224ENST00000584083 ZNF318Q5VUA4 2279 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 MYL4P12829 197 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 PSMD6Q15008 389 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 PARM1Q6UWI2 310 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 PDCL2Q8N4E4 241 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 TTC9BQ8N6N2 239 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 HPDLQ96IR7 371 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 ASAH2Q9NR71 780 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 ZDBF2Q9HCK1 2354 aa21.97■■□□□ 1.11
SS18-224ENST00000584083 PRPF40AO75400 957 aaKnown RBP21.96■■□□□ 1.11
SS18-224ENST00000584083 CFHP08603 1231 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 SRFP11831 508 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 CEBPBP17676 345 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 DPYDQ12882 1025 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 DCP1BQ8IZD4 617 aaKnown RBP21.96■■□□□ 1.11
SS18-224ENST00000584083 FGF14Q92915 247 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 TCEAL4Q96EI5 215 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 CGRRF1Q99675 332 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 RPP25Q9BUL9 199 aaKnown RBP21.96■■□□□ 1.11
SS18-224ENST00000584083 GDAP2Q9NXN4 497 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 GDE1Q9NZC3 331 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 L1RE1Q9UN81 338 aa21.96■■□□□ 1.11
SS18-224ENST00000584083 SOAT2O75908 522 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 TUFMP49411 452 aaKnown RBP21.95■■□□□ 1.1
SS18-224ENST00000584083 TSPY1Q01534 308 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 MGAT5BQ3V5L5 792 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 PRSS36Q5K4E3 855 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 TRAPPC11Q7Z392 1133 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 TMEM86AQ8N2M4 240 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 LEMD2Q8NC56 503 aa21.95■■□□□ 1.1
SS18-224ENST00000584083 SEPT5Q99719 369 aaPredicted RBP21.95■■□□□ 1.1
SS18-224ENST00000584083 ARIH1Q9Y4X5 557 aaPredicted RBP21.95■■□□□ 1.1
SS18-224ENST00000584083 KMT2EQ8IZD2 1858 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 RHOBTB3O94955 611 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 KIF20AO95235 890 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 CCR2P41597 374 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 VCPP55072 806 aaKnown RBP21.94■■□□□ 1.1
SS18-224ENST00000584083 MYL7Q01449 175 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 SMARCB1Q12824 385 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 LRRTM3Q86VH5 581 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 ADGRF2Q8IZF7 708 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 TOP6BLQ8N6T0 577 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 FAM200AQ8TCP9 573 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 C2orf15Q8WU43 125 aaKnown RBP21.94■■□□□ 1.1
SS18-224ENST00000584083 KXD1Q9BQD3 176 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 KCTD10Q9H3F6 313 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 DDX43Q9NXZ2 648 aaKnown RBP21.94■■□□□ 1.1
SS18-224ENST00000584083 ABI2Q9NYB9 513 aaPredicted RBP21.94■■□□□ 1.1
SS18-224ENST00000584083 HSFX1Q9UBD0 423 aa21.94■■□□□ 1.1
SS18-224ENST00000584083 PDXKO00764 312 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 MICAL2O94851 1124 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 NR3C1P04150 777 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 ACAT1P24752 427 aaKnown RBP21.93■■□□□ 1.1
SS18-224ENST00000584083 AVPR2P30518 371 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 SIX5Q8N196 739 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 FLCNQ8NFG4 579 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 SPPL2BQ8TCT7 592 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 DNAJC25Q9H1X3 360 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 DMAC2Q9NW81 257 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 WNT16Q9UBV4 365 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 MAPK8IP1Q9UQF2 711 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 ASB3Q9Y575 518 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 PCDHB5Q9Y5E4 795 aa21.93■■□□□ 1.1
SS18-224ENST00000584083 CALUO43852 315 aaPredicted RBP21.92■■□□□ 1.1
SS18-224ENST00000584083 PHACTR2O75167 634 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 CST3P01034 146 aaPredicted RBP21.92■■□□□ 1.1
SS18-224ENST00000584083 GJA1P17302 382 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 LHX1P48742 406 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms