RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 TRIM55Q9BYV6 548 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.94
BDNF-219ENST00000584049 TOPORSQ9NS56 1045 aaPredicted RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 ZNF148Q9UQR1 794 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 MTO1Q9Y2Z2 717 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 SMAPO00193 183 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 JAG1P78504 1218 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 GPS1Q13098 491 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 OASLQ15646 514 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 ADGRD1Q6QNK2 874 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 MTDHQ86UE4 582 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 ARHGAP24Q8N264 748 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 GPD1LQ8N335 351 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 ZNF276Q8N554 614 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 FRMD8P1Q9BZ68 369 aaPredicted RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 AGO4Q9HCK5 861 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 PAPOLBQ9NRJ5 636 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 TBC1D22BQ9NU19 505 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
BDNF-219ENST00000584049 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
BDNF-219ENST00000584049 A8MXQ7 604 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 G3V3G9 751 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 H0Y3Z8 333 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 SMIM24O75264 130 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 CD58P19256 250 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ECE1P42892 770 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 CLDN10P78369 228 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 GHRHRQ02643 423 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SLC34A1Q06495 639 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 DMP1Q13316 513 aaPredicted RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 FASTKD3Q14CZ7 662 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 SEPT7Q16181 437 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 DCAF8Q5TAQ9 597 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 STRIP1Q5VSL9 837 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SNX30Q5VWJ9 437 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ZBED8Q8IZ13 594 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ABRAQ8N0Z2 381 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.16□□□□□ -0.94
BDNF-219ENST00000584049 NTPCRQ9BSD7 190 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 CCDC28BQ9BUN5 200 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ACSS3Q9H6R3 686 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SYNCQ9H7C4 482 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 STX18Q9P2W9 335 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 ZNF212Q9UDV6 495 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 UBIAD1Q9Y5Z9 338 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ASTN2O75129 1339 aaPredicted RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 GSC2O15499 205 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PDHA1P08559 390 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 FGFR1P11362 822 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 KRT4P19013 534 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ABCD1P33897 745 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 MAPK6Q16659 721 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 GSTA3Q16772 222 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 NBPF20Q3BBV1 942 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 KHDC1Q4VXA5 237 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 OR52E8Q6IFG1 317 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SKA1Q96BD8 255 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ZBTB10Q96DT7 871 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PARVAQ9NVD7 372 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 CPSF2Q9P2I0 782 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 RABGEF1Q9UJ41 708 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 POLIQ9UNA4 740 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 ZNF646O15015 1829 aaPredicted RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 NPTX2P47972 431 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PSMC5P62195 406 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 CDK16Q00536 496 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PDIA2Q13087 525 aaKnown RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 HIF1AQ16665 826 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 BANPQ8N9N5 519 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 PPFIBP2Q8ND30 876 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 MZB1Q8WU39 189 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 SENP7Q9BQF6 1050 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
BDNF-219ENST00000584049 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.16□□□□□ -0.94
BDNF-219ENST00000584049 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
BDNF-219ENST00000584049 DENND3A2RUS2 1198 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 TLR3O15455 904 aaKnown RBP9.15□□□□□ -0.94
BDNF-219ENST00000584049 PSMG1O95456 288 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 DHRS4L1P0CG22 281 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 GNAT1P11488 350 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 ADRA1DP25100 572 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 JAK3P52333 1124 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 INHBEP58166 350 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 AP1B1Q10567 949 aa9.15□□□□□ -0.94
BDNF-219ENST00000584049 RCN1Q15293 331 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms