RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SPTBN2O15020 2390 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 SCN1AP35498 2009 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 A0A1W2PQ27 194 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 A0A1W2PQ64 194 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 A0A1W2PQD8 194 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 MTMR11A4FU01 709 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 HEPACAM2A8MVW5 462 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 MICAL2O94851 1124 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 OAZ2O95190 189 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 PSMC3P17980 439 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 DUSP4Q13115 394 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 GAS6Q14393 721 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 LPAL2Q16609 132 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 WDR44Q5JSH3 913 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 OR10T2Q8NGX3 314 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 DEPDC1BQ8WUY9 529 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 FAM3CQ92520 227 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 MKNK1Q9BUB5 465 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 IKZF4Q9H2S9 585 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 HPSEQ9Y251 543 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
SKA2-209ENST00000583976 MRPS17Q9Y2R5 130 aaKnown RBP16.96■□□□□ 0.31
SKA2-209ENST00000583976 KIF26AQ9ULI4 1882 aaPredicted RBP16.96■□□□□ 0.31
SKA2-209ENST00000583976 SLC38A8A6NNN8 435 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 GADD45BO75293 160 aaPredicted RBP16.95■□□□□ 0.3
SKA2-209ENST00000583976 FAM13AO94988 1023 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 SYKP43405 635 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 AFMP43652 599 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 SATB1Q01826 763 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 RSPO4Q2I0M5 234 aaPredicted RBP16.95■□□□□ 0.3
SKA2-209ENST00000583976 OVOS1Q6IE37 1185 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 DSTYKQ6XUX3 929 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 CEP57L1Q8IYX8 460 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 IRF7Q92985 503 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 FIZ1Q96SL8 496 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 NELL2Q99435 816 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 CUEDC2Q9H467 287 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
SKA2-209ENST00000583976 DLL3Q9NYJ7 618 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 LARSQ9P2J5 1176 aaKnown RBP16.95■□□□□ 0.3
SKA2-209ENST00000583976 TBX20Q9UMR3 447 aa16.95■□□□□ 0.3
SKA2-209ENST00000583976 OGTO15294 1046 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 NCAM2O15394 837 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
SKA2-209ENST00000583976 PIGRP01833 764 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 CCNE1P24864 410 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 CASP1P29466 404 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 HOXC13P31276 330 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 DMWDQ09019 674 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 Q6ZS52 159 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 USP37Q86T82 979 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 GRAMD1CQ8IYS0 662 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 MYCT1Q8N699 235 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 LEMD2Q8NC56 503 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 TTC8Q8TAM2 541 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 ZFYVE19Q96K21 471 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 LRRC3BQ96PB8 259 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
SKA2-209ENST00000583976 MSTO1Q9BUK6 570 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
SKA2-209ENST00000583976 TRPV4Q9HBA0 871 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 PARD6AQ9NPB6 346 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 KBTBD4Q9NVX7 518 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
SKA2-209ENST00000583976 OR6C75A6NL08 312 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 MAN2B1O00754 1011 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 ZNF263O14978 683 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
SKA2-209ENST00000583976 PRAMEF12O95522 483 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 IDEP14735 1019 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 CYP3A5P20815 502 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
SKA2-209ENST00000583976 ZNF131P52739 623 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 CYP4F8P98187 520 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 AMPD3Q01432 767 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
SKA2-209ENST00000583976 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 TXNDC11Q6PKC3 985 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 GAREM2Q75VX8 874 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 DNAJC19Q96DA6 116 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 SENP8Q96LD8 212 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 LMAN1LQ9HAT1 526 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 PARVGQ9HBI0 331 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 C2orf42Q9NWW7 574 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
SKA2-209ENST00000583976 OBSL1O75147 1896 aa16.93■□□□□ 0.3
SKA2-209ENST00000583976 A0A0B4J269 797 aa16.92■□□□□ 0.3
SKA2-209ENST00000583976 FAM237AA0A1B0GTK4 181 aa16.92■□□□□ 0.3
SKA2-209ENST00000583976 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
SKA2-209ENST00000583976 H0YCG3 227 aa16.92■□□□□ 0.3
SKA2-209ENST00000583976 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms