RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NDRG2Q9UN36 371 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 TNFSF13BQ9Y275 285 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 INSL5Q9Y5Q6 135 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 NCANO14594 1321 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 TPRP12270 2363 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 TCHHQ07283 1943 aa8.52□□□□□ -1.04
SMCHD1-210ENST00000583800 K7ERI5 159 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 NCAM2O15394 837 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 MEFVO15553 781 aaPredicted RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 TBC1D4O60343 1298 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 HIP1RO75146 1068 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 HARSP12081 509 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ATF2P15336 505 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 GJA1P17302 382 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 NPTX2P47972 431 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 NEK4P51957 841 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 SEC13P55735 322 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 PEX3P56589 373 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 SAFBQ15424 915 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 LPAL2Q16609 132 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 CTXN3Q4LDR2 81 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 XKR4Q5GH76 650 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 FAM78AQ5JUQ0 283 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 TTC38Q5R3I4 469 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ALKAL1Q6UXT8 129 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 RTL10Q7L3V2 364 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 APBB1IPQ7Z5R6 666 aaPredicted RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 C18orf25Q96B23 403 aaPredicted RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 C8orf76Q96K31 380 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 NELL2Q99435 816 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 TARS2Q9BW92 718 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 MRPL4Q9BYD3 311 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 BRD9Q9H8M2 597 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ZFP14Q9HCL3 533 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 PTPRHQ9HD43 1115 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 DDX19AQ9NUU7 478 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 USP18Q9UMW8 372 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 KIAA1024Q9UPX6 916 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 MRPS17Q9Y2R5 130 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 NUB1Q9Y5A7 615 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ATG2BQ96BY7 2078 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 ZNF638Q14966 1978 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-210ENST00000583800 GREB1Q4ZG55 1949 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 DENND4CQ5VZ89 1909 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 E9PMD0 336 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 H7C4K7 107 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ABLIM1O14639 778 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 SYN3O14994 580 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 MOSPD3O75425 235 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 MYL4P12829 197 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 TDGF1P13385 188 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 MUTP22033 750 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 GDI1P31150 447 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CTHP32929 405 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 MCM4P33991 863 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 VIPR2P41587 438 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ATXN1P54253 815 aaKnown RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 PTK2Q05397 1052 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 TWF1Q12792 350 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 DMP1Q13316 513 aaPredicted RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ORC2Q13416 577 aaPredicted RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 SEZ6Q53EL9 994 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ZNF280DQ6N043 979 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 VITQ6UXI7 678 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CCDC83Q8IWF9 413 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 TCEAL8Q8IYN2 117 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 DAW1Q8N136 415 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 EHBP1Q8NDI1 1231 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 FAM3CQ92520 227 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 SECISBP2LQ93073 1101 aaKnown RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 BORCS6Q96GS4 357 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ZSWIM3Q96MP5 696 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 RUSC1Q9BVN2 902 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 TRMT61BQ9BVS5 477 aaKnown RBP8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CHRDQ9H2X0 955 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 PARD6AQ9NPB6 346 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 SLC38A7Q9NVC3 462 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CEP72Q9P209 647 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 CNTN3Q9P232 1028 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 ARHGAP28Q9P2N2 729 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 TUBGCP4Q9UGJ1 667 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 GMEB2Q9UKD1 530 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 PIAS3Q9Y6X2 628 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 OBSL1O75147 1896 aa8.51□□□□□ -1.05
SMCHD1-210ENST00000583800 EML5Q05BV3 1969 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 PP2D1A8MPX8 630 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 MAN2B1O00754 1011 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms