RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 BMP5P22003 454 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 FOLR3P41439 243 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 CLK3P49761 638 aaKnown RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 RARRES1P49788 294 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 TOB1P50616 345 aaPredicted RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 HNRNPMP52272 730 aaKnown RBP eCLIP4.62□□□□□ -1.67
VAPA-206ENST00000583475 EXOSC9Q06265 439 aaKnown RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 HLXQ14774 488 aaPredicted RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 LRRC41Q15345 812 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 NFE2Q16621 373 aaPredicted RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 PRR16Q569H4 304 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 CCDC157Q569K6 752 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 PPP1R32Q7Z5V6 425 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 FBXO41Q8TF61 875 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 LPIN2Q92539 896 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 SLC9A6Q92581 669 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 SLC35A4Q96G79 324 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 SMOC2Q9H3U7 446 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 RSAD1Q9HA92 442 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.62□□□□□ -1.67
VAPA-206ENST00000583475 FOXJ2Q9P0K8 574 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 GABBR1Q9UBS5 961 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 PCDHA6Q9UN73 950 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 STXBP5LQ9Y2K9 1186 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 SPATA31A3Q5VYP0 1347 aa4.62□□□□□ -1.67
VAPA-206ENST00000583475 H3BML4 177 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 TOR1BO14657 336 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 YY2O15391 372 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 PRPF3O43395 683 aaKnown RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 PROM1O43490 865 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 UBXN7O94888 489 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 CXCR5P32302 372 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 SIM1P81133 766 aaPredicted RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 BOP1Q14137 746 aaKnown RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 TAF2Q6P1X5 1199 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 FAM9AQ8IZU1 332 aaPredicted RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 SIMC1Q8NDZ2 872 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 PPP1R35Q8TAP8 253 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 SNX19Q92543 992 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 DDX17Q92841 729 aaKnown RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 PDLIM2Q96JY6 352 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 TAAR9Q96RI9 348 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 ACO2Q99798 780 aaKnown RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 CNPPD1Q9BV87 410 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 TINAGL1Q9GZM7 467 aaPredicted RBP4.61□□□□□ -1.67
VAPA-206ENST00000583475 SIK2Q9H0K1 926 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 ARMT1Q9H993 441 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 NMRK2Q9NPI5 230 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 ZNHIT2Q9UHR6 403 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 EID1Q9Y6B2 187 aa4.61□□□□□ -1.67
VAPA-206ENST00000583475 ZAR1LA6NP61 321 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 PEX1O43933 1283 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 VPS4BO75351 444 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 DNAJB5O75953 348 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 NUDT3O95989 172 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 S100BP04271 92 aaPredicted RBP4.6□□□□□ -1.67
VAPA-206ENST00000583475 IL12RB1P42701 662 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 NPTX2P47972 431 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 MRPS35P82673 323 aaKnown RBP4.6□□□□□ -1.67
VAPA-206ENST00000583475 KHDC1LQ5JSQ8 128 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 DENND1CQ8IV53 801 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 CHPFQ8IZ52 775 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 CAMKK1Q8N5S9 505 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 CELF5Q8N6W0 485 aaKnown RBP4.6□□□□□ -1.67
VAPA-206ENST00000583475 PSD4Q8NDX1 1056 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 BRIX1Q8TDN6 353 aaKnown RBP4.6□□□□□ -1.67
VAPA-206ENST00000583475 AMBRA1Q9C0C7 1298 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 PRDM13Q9H4Q3 707 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 RIOX1Q9H6W3 641 aa4.6□□□□□ -1.67
VAPA-206ENST00000583475 NOB1Q9ULX3 412 aaKnown RBP4.6□□□□□ -1.67
VAPA-206ENST00000583475 A0A0B4J269 797 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 F5H697 171 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 MPPED1O15442 326 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 GNAI2P04899 355 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 PPP3CBP16298 524 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 HTR1BP28222 390 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 PTH2RP49190 550 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 SOX8P57073 446 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 NANOS3P60323 173 aaKnown RBP4.59□□□□□ -1.67
VAPA-206ENST00000583475 RAB1AP62820 205 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 TUBB3Q13509 450 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 FGL2Q14314 439 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 PTPRRQ15256 657 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 PREPLQ4J6C6 727 aaPredicted RBP4.59□□□□□ -1.67
VAPA-206ENST00000583475 ZNF362Q5T0B9 420 aaPredicted RBP4.59□□□□□ -1.67
VAPA-206ENST00000583475 FAM102BQ5T8I3 360 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 FAM160B1Q5W0V3 765 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 CXorf57Q6NSI4 855 aaKnown RBP4.59□□□□□ -1.67
VAPA-206ENST00000583475 DNAJC10Q8IXB1 793 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 ANKRD13AQ8IZ07 590 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 FAM46DQ8NEK8 389 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 MRGPRX1Q96LB2 322 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 SARS2Q9NP81 518 aaKnown RBP4.59□□□□□ -1.67
VAPA-206ENST00000583475 LRIT1Q9P2V4 623 aa4.59□□□□□ -1.67
VAPA-206ENST00000583475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.59□□□□□ -1.67
VAPA-206ENST00000583475 VWC2LB2RUY7 222 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 M0QYG6 137 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms