RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ARHGAP20Q9P2F6 1191 aa12.82□□□□□ -0.36
CCDC57-216ENST00000582885 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
CCDC57-216ENST00000582885 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
CCDC57-216ENST00000582885 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 SYN3O14994 580 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 TADA2AO75478 443 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ITGB1P05556 798 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 SKILP12757 684 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 CYP11B1P15538 503 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 IGFBP6P24592 240 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 GNL1P36915 607 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 RAP1GAPP47736 663 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 RAD23BP54727 409 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ARID5AQ03989 594 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ASTE1Q2TB18 679 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 KCNT2Q6UVM3 1135 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 TMCO2Q7Z6W1 182 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 METTL23Q86XA0 190 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ADGRF2Q8IZF7 708 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 CRYBG2Q8N1P7 616 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 EPS8L1Q8TE68 723 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 RABGGTAQ92696 567 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 TRIM44Q96DX7 344 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ZNF558Q96NG5 402 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 GDF15Q99988 308 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 MRPL45Q9BRJ2 306 aaKnown RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 NT5C1AQ9BXI3 368 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 SNX25Q9H3E2 840 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 KCNF1Q9H3M0 494 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 NHEJ1Q9H9Q4 299 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 AAASQ9NRG9 546 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 NOCTQ9UK39 431 aaKnown RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 PRG3Q9Y2Y8 225 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 MRPL42Q9Y6G3 142 aaKnown RBP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 SF3B1O75533 1304 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC57-216ENST00000582885 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
CCDC57-216ENST00000582885 PPM1AP35813 382 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
CCDC57-216ENST00000582885 BRCC3P46736 316 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 PDE6CP51160 858 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 NDST1P52848 882 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 CDR2Q01850 454 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 BMS1Q14692 1282 aaKnown RBP12.8□□□□□ -0.36
CCDC57-216ENST00000582885 WSCD1Q658N2 575 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 SLC47A2Q86VL8 602 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 VPS36Q86VN1 386 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
CCDC57-216ENST00000582885 FIBCD1Q8N539 461 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 SLC4A11Q8NBS3 891 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 OR6B3Q8NGW1 331 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 DDX1Q92499 740 aaKnown RBP12.8□□□□□ -0.36
CCDC57-216ENST00000582885 IGSF21Q96ID5 467 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 ELOVL4Q9GZR5 314 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 STK39Q9UEW8 545 aa12.8□□□□□ -0.36
CCDC57-216ENST00000582885 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
CCDC57-216ENST00000582885 F8W810 466 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 MED7O43513 233 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 TLL1O43897 1013 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 OAZ2O95190 189 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 LCA5LO95447 670 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 PLEKP08567 350 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 VDRP11473 427 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 FGFR3P22607 806 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 PCSK1P29120 753 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 GNA15P30679 374 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 BMP8BP34820 402 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 SHHQ15465 462 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 STILQ15468 1287 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 C9orf50Q5SZB4 431 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 FUT10Q6P4F1 479 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 OSTM1Q86WC4 334 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 SLC39A11Q8N1S5 342 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 HASPINQ8TF76 798 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 ZNF606Q8WXB4 792 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 RNPC3Q96LT9 517 aaKnown RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 AGPAT1Q99943 283 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 SPG21Q9NZD8 308 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms