RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 SLC45A4Q5BKX6 768 aa17.1■□□□□ 0.33
RFNG-208ENST00000582478 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
RFNG-208ENST00000582478 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
RFNG-208ENST00000582478 TMIGD2Q96BF3 282 aa17.1■□□□□ 0.33
RFNG-208ENST00000582478 MTBPQ96DY7 904 aa17.1■□□□□ 0.33
RFNG-208ENST00000582478 SEPT11Q9NVA2 429 aaKnown RBP17.1■□□□□ 0.33
RFNG-208ENST00000582478 CES2O00748 559 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 BMP15O95972 392 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 NELFEP18615 380 aaKnown RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 SERPINB6P35237 376 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 RPA3P35244 121 aaPredicted RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 DEPDC1Q5TB30 811 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 ROPN1BQ9BZX4 212 aaPredicted RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 ROPN1Q9HAT0 212 aaPredicted RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 GGA1Q9UJY5 639 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 PLCG1P19174 1290 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 SNAP25P60880 206 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
RFNG-208ENST00000582478 EXOC8Q8IYI6 725 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 NAGPAQ9UK23 515 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 DMTF1Q9Y222 760 aa17.09■□□□□ 0.33
RFNG-208ENST00000582478 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 NOTOA8MTQ0 251 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 TRAF5O00463 557 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 PIAS1O75925 651 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 APOEP02649 317 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.33
RFNG-208ENST00000582478 CDH3P22223 829 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 NR4A1P22736 598 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 SPARCL1Q14515 664 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 SF3B4Q15427 424 aaKnown RBP eCLIP17.08■□□□□ 0.336e-8■■■■□ 25.2
RFNG-208ENST00000582478 SLC1A5Q15758 541 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 UGT2A3Q6UWM9 527 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 AMIGO2Q86SJ2 522 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 RUNDC3BQ96NL0 473 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 TMEM109Q9BVC6 243 aa17.08■□□□□ 0.33
RFNG-208ENST00000582478 SENP6Q9GZR1 1112 aaPredicted RBP17.08■□□□□ 0.33
RFNG-208ENST00000582478 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.08■□□□□ 0.33
RFNG-208ENST00000582478 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 BTBD19C9JJ37 291 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 BUD23O43709 281 aaKnown RBP17.08■□□□□ 0.32
RFNG-208ENST00000582478 EPHB1P54762 984 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 ALG3Q92685 438 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 RBM15Q96T37 977 aaKnown RBP eCLIP17.08■□□□□ 0.324e-7■■■■□ 24
RFNG-208ENST00000582478 PLGRKTQ9HBL7 147 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 SAR1AQ9NR31 198 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 ASIC3Q9UHC3 531 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 SYNPO2Q9UMS6 1093 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 AK5Q9Y6K8 562 aa17.08■□□□□ 0.32
RFNG-208ENST00000582478 CICQ96RK0 1608 aaPredicted RBP17.08■□□□□ 0.32
RFNG-208ENST00000582478 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 MEI4A8MW99 385 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 APBA3O96018 575 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
RFNG-208ENST00000582478 SLC16A2P36021 539 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 PSMC1P62191 440 aaKnown RBP17.07■□□□□ 0.32
RFNG-208ENST00000582478 DTHD1Q6ZMT9 781 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 ACTRT2Q8TDY3 377 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 PTCD3Q96EY7 689 aaKnown RBP17.07■□□□□ 0.32
RFNG-208ENST00000582478 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 EHD1Q9H4M9 534 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
RFNG-208ENST00000582478 ADAMTS6Q9UKP5 1117 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 PCDHGA3Q9Y5H0 932 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 TMX2-CTNND1H3BSU7 103 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 SORBS2O94875 1100 aaKnown RBP17.07■□□□□ 0.32
RFNG-208ENST00000582478 CHRNB2P17787 502 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 MARCKSL1P49006 195 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 KRT81Q14533 505 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 TLR1Q15399 786 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 ANKRD20A4Q4UJ75 823 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 VPS50Q96JG6 964 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 TIMM44O43615 452 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 KRT72Q14CN4 511 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 EFTUD2Q15029 972 aaKnown RBP eCLIP17.07■□□□□ 0.322e-7■■■□□ 17.2
RFNG-208ENST00000582478 ZNF423Q2M1K9 1284 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 C3orf62Q6ZUJ4 267 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 ANKRD35Q8N283 1001 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 GABPB2Q8TAK5 448 aaPredicted RBP17.07■□□□□ 0.32
RFNG-208ENST00000582478 NACC2Q96BF6 587 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 SLC7A8Q9UHI5 535 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 ATRNO75882 1429 aa17.07■□□□□ 0.32
RFNG-208ENST00000582478 GOLGA8TH3BQL2 631 aa17.06■□□□□ 0.32
RFNG-208ENST00000582478 FLT1P17948 1338 aa17.06■□□□□ 0.32
RFNG-208ENST00000582478 PDK1Q15118 436 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms