RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MAPK13O15264 365 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 ECI2O75521 394 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 CSDE1O75534 798 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 TPM2P07951 284 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 POU2F2P09086 479 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 GARTP22102 1010 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 PRCPP42785 496 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 OR1G1P47890 313 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 MYL5Q02045 173 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 RING1Q06587 406 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 RAD51AP2Q09MP3 1159 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 STK4Q13043 487 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 CAPSQ13938 189 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 TPD52L1Q16890 204 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 STPG1Q5TH74 334 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 MAEAQ7L5Y9 396 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 TAS1R1Q7RTX1 841 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 LONP2Q86WA8 852 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 KIAA0895Q8NCT3 520 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 SCFD1Q8WVM8 642 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 NLRP4Q96MN2 994 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 CEP63Q96MT8 703 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 ADPGKQ9BRR6 497 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 MKNK1Q9BUB5 465 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 LSM14BQ9BX40 385 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 FZD8Q9H461 694 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 METTL14Q9HCE5 456 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 SLC39A2Q9NP94 309 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 HEBP1Q9NRV9 189 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 PCDHB2Q9Y5E7 798 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
PDLIM1P3-201ENST00000582370 VWA8A3KMH1 1905 aa9.46□□□□□ -0.89
PDLIM1P3-201ENST00000582370 NPHP3-ACAD11A0A0J9YXS1 232 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SFI1A8K8P3 1242 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TAF4O00268 1085 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 BIN1O00499 593 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 N4BP3O15049 544 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CETN3O15182 167 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SLC16A4O15374 487 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HRO43593 1189 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 XYLBO75191 536 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TOM1L1O75674 476 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PAPSS2O95340 614 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TPM3P06753 285 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZNF806P0C7X5 589 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SRGAP2CP0DJJ0 459 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CXCL12P48061 93 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 LIG4P49917 911 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SURF1Q15526 300 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 USP41Q3LFD5 358 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DPCR1Q3MIW9 517 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SPATA1Q5VX52 437 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SMYD5Q6GMV2 418 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NOTUMQ6P988 496 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CATSPER4Q7RTX7 472 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MRPL10Q7Z7H8 261 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 COLGALT2Q8IYK4 626 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ITFG1Q8TB96 612 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NELFBQ8WX92 580 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 BICD1Q96G01 975 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 LOXL4Q96JB6 756 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FIZ1Q96SL8 496 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SH2D3AQ9BRG2 576 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCDC113Q9H0I3 377 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 THAP9Q9H5L6 903 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 IFT122Q9HBG6 1241 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GPRC5CQ9NQ84 441 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 RXFP3Q9NSD7 469 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AGPAT5Q9NUQ2 364 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MAGEC2Q9UBF1 373 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NDRG2Q9UN36 371 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FRMD4BQ9Y2L6 1034 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZMYM2Q9UBW7 1377 aa9.46□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NUP205Q92621 2012 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 A0A087WWV3 80 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 A0A087WZ62 844 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CHURC1-FNTBB4DL54 471 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SLC16A3O15427 465 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CLDN3O15551 220 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 STX10O60499 249 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 POMCP01189 267 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PRKCBP05771 671 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 C8AP07357 584 aa9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CASP1P29466 404 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms