RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 STXBP5Q5T5C0 1151 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 GPR158Q5T848 1215 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 ATF7IP2Q5U623 682 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 ALKAL1Q6UXT8 129 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 TMC8Q8IU68 726 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 BPIFB1Q8TDL5 484 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 BSNDQ8WZ55 320 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 IPO9Q96P70 1041 aaKnown RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 TMEM9BQ9NQ34 198 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 THG1LQ9NWX6 298 aaKnown RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 NEUROG3Q9Y4Z2 214 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 YIPF1Q9Y548 306 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 DMXL2Q8TDJ6 3036 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 ANKRD11Q6UB99 2663 aaPredicted RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 SDK1Q7Z5N4 2213 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TAF4O00268 1085 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DCLK1O15075 740 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 FGF19O95750 216 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 KCNE1P15382 129 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 CYP11B2P19099 503 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 GABRR2P28476 465 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 MCM4P33991 863 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 HSPA4P34932 840 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TXKP42681 527 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 OSTNP61366 133 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 AMPD2Q01433 879 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DUSP4Q13115 394 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ARHGAP15Q53QZ3 475 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 BMP2KLQ5H9B9 411 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 EARS2Q5JPH6 523 aaKnown RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 FSTL4Q6MZW2 842 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DNAJB7Q7Z6W7 309 aaPredicted RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DEFB124Q8NES8 71 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 BEST2Q8NFU1 509 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ZNF274Q96GC6 653 aaPredicted RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 IFT74Q96LB3 600 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ZMAT2Q96NC0 199 aaKnown RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 PGLYRP2Q96PD5 576 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 NACC1Q96RE7 527 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 MKNK1Q9BUB5 465 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TUFT1Q9NNX1 390 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 GKN1Q9NS71 199 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 TNFSF13BQ9Y275 285 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ASB3Q9Y575 518 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 WDFY3Q8IZQ1 3526 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 AKAP13Q12802 2813 aa8.32□□□□□ -1.08
CCDC47-205ENST00000582331 DSPP15924 2871 aaKnown RBP8.32□□□□□ -1.08
CCDC47-205ENST00000582331 ARHGEF35A5YM69 484 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 K7ERI5 159 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 CDX4O14627 284 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 TRDMT1O14717 391 aaKnown RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 HYAL3O43820 417 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 VNN2O95498 520 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 APBB3O95704 486 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 EGFP01133 1207 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 DRD1P21728 446 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 WEE1P30291 646 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 GBP1P32455 592 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 MCM2P49736 904 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 YWHAHQ04917 246 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 STK3Q13188 491 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 RUNX3Q13761 415 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 TOB2Q14106 344 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 UAP1L1Q3KQV9 507 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 KIAA1211LQ6NV74 962 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 GAREM2Q75VX8 874 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 CEP120Q8N960 986 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 C18orf25Q96B23 403 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 ACAP3Q96P50 834 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 KIFC3Q9BVG8 833 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 IRX2Q9BZI1 471 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 CDT1Q9H211 546 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 CRISPLD1Q9H336 500 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 SLC32A1Q9H598 525 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 GJB4Q9NTQ9 266 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 POLR3BQ9NW08 1133 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 EBF1Q9UH73 591 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 SLC27A5Q9Y2P5 690 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 MSRB2Q9Y3D2 182 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 SPAG17Q6Q759 2223 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
CCDC47-205ENST00000582331 ZFYVE26Q68DK2 2539 aa8.31□□□□□ -1.08
CCDC47-205ENST00000582331 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 OR6C75A6NL08 312 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 MEFVO15553 781 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 CDC45O75419 566 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 CDKL5O76039 1030 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 OAZ2O95190 189 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms