RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 GVINP1Q7Z2Y8 2422 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 GCNT3O95395 438 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 FGF19O95750 216 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 STXBP5Q5T5C0 1151 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 WSCD1Q658N2 575 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 GAREM2Q75VX8 874 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 ITIH5Q86UX2 942 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 NT5DC4Q86YG4 428 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 RSPRY1Q96DX4 576 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 BORCS6Q96GS4 357 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 USP28Q96RU2 1077 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 OLFML3Q9NRN5 406 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 PIAS3Q9Y6X2 628 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 NCANO14594 1321 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 PDCD11Q14690 1871 aaKnown RBP18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 FAM186AA6NE01 2351 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 MYH11P35749 1972 aa18.9■□□□□ 0.62
CSNK1D-214ENST00000580565 A0A087X0B3 334 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 KPNA7A9QM74 516 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 IDEP14735 1019 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 STAT6P42226 847 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 CDR1P51861 262 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 CASP5P51878 434 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 SV2CQ496J9 727 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 LRRTM3Q86VH5 581 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 ARID3BQ8IVW6 561 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 YAF2Q8IY57 180 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 FAM3CQ92520 227 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 SEPT5Q99719 369 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
CSNK1D-214ENST00000580565 FRMD3A2A2Y4 597 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 TULP1O00294 542 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 ARNTLO00327 626 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 GABRR2P28476 465 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 MLLT6P55198 1093 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 WNT7BP56706 349 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 TFAMQ00059 246 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 FCHO2Q0JRZ9 810 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 SMARCB1Q12824 385 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 MTAPQ13126 283 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 ALCAMQ13740 583 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 VEPH1Q14D04 833 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 MGAT5BQ3V5L5 792 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 GPIHBP1Q8IV16 184 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 SYCP3Q8IZU3 236 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 SUMF1Q8NBK3 374 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 ZSWIM2Q8NEG5 633 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 C2orf15Q8WU43 125 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 ATRIPQ8WXE1 791 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 SAAL1Q96ER3 474 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 LPIN3Q9BQK8 851 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 PANK4Q9NVE7 773 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
CSNK1D-214ENST00000580565 FRYLO94915 3013 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 CHADO15335 359 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 STX6O43752 255 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 LDHAP00338 332 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 ATF6P18850 670 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 GARTP22102 1010 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 PNPLA4P41247 253 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 ARHGAP15Q53QZ3 475 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 GPR158Q5T848 1215 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 BRSK2Q8IWQ3 736 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 CSGALNACT1Q8TDX6 532 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 RUBCNQ92622 972 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 NELL1Q92832 810 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 ZNF560Q96MR9 790 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 FGFBP2Q9BYJ0 223 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 SPTBN4Q9H254 2564 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 CHRDQ9H2X0 955 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 LMAN1LQ9HAT1 526 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 PRMT8Q9NR22 394 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 ZSCAN32Q9NX65 697 aa18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 RBAKQ9NYW8 714 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-214ENST00000580565 HAPLN1P10915 354 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 CCNE1P24864 410 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 ID4P47928 161 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 TSSK4Q6SA08 328 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 MAMSTRQ6ZN01 415 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 PDILTQ8N807 584 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 ZBTB44Q8NCP5 570 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 SPPL2BQ8TCT7 592 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 CACTINQ8WUQ7 758 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 LRRC3BQ96PB8 259 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 BACH2Q9BYV9 841 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 TASP1Q9H6P5 420 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 AGAP1Q9UPQ3 857 aa18.86■□□□□ 0.61
CSNK1D-214ENST00000580565 EP300Q09472 2414 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-214ENST00000580565 GOLGA8IPA6NC78 632 aa18.85■□□□□ 0.61
CSNK1D-214ENST00000580565 GOLGA8JA6NMD2 632 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms