RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-208ENST00000580237 OR10T2Q8NGX3 314 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-208ENST00000580237 C11orf16Q9NQ32 467 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 ABI2Q9NYB9 513 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-208ENST00000580237 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 CDH7Q9ULB5 785 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 ZFP37Q9Y6Q3 630 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-208ENST00000580237 PTPRDP23468 1912 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 DENND4CQ5VZ89 1909 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 TMEM221A6NGB7 291 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 M0R296 226 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 MYL4P12829 197 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 LAMP2P13473 410 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 PTPN2P17706 415 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 NR2F2P24468 414 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 TNNC1P63316 161 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 DUSP4Q13115 394 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 TDGQ13569 410 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 MGAT5BQ3V5L5 792 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 MTSS1LQ765P7 747 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 SUGP1Q8IWZ8 645 aaKnown RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 TMEM86AQ8N2M4 240 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 ATAD1Q8NBU5 361 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 FGF13Q92913 245 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 TMEM209Q96SK2 561 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 KCTD10Q9H3F6 313 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 KCNK12Q9HB15 430 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 DNMT3BQ9UBC3 853 aaKnown RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 SIX4Q9UIU6 781 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 FBXL21Q9UKT6 434 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 L1RE1Q9UN81 338 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 OBSL1O75147 1896 aa11.71□□□□□ -0.53
NDEL1-208ENST00000580237 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.53
NDEL1-208ENST00000580237 ZDBF2Q9HCK1 2354 aa11.71□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF197O14709 1029 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 COL9A1P20849 921 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 RFX1P22670 979 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
NDEL1-208ENST00000580237 PCSK1P29120 753 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 CDR1P51861 262 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SMARCB1Q12824 385 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 TAF12Q16514 161 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 TRAPPC11Q7Z392 1133 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SLC9A9Q8IVB4 645 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
NDEL1-208ENST00000580237 GUF1Q8N442 669 aaKnown RBP11.7□□□□□ -0.54
NDEL1-208ENST00000580237 TOP6BLQ8N6T0 577 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 LEMD2Q8NC56 503 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 ITFG1Q8TB96 612 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SPPL2BQ8TCT7 592 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
NDEL1-208ENST00000580237 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SMOC2Q9H3U7 446 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 GDAP2Q9NXN4 497 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 MIA3Q5JRA6 1907 aa11.7□□□□□ -0.54
NDEL1-208ENST00000580237 SOAT2O75908 522 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 KRT13P13646 458 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 CEBPBP17676 345 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 ACAT1P24752 427 aaKnown RBP11.69□□□□□ -0.54
NDEL1-208ENST00000580237 LHX1P48742 406 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 CASP4P49662 377 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 AP3M2P53677 418 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 STIM1Q13586 685 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
NDEL1-208ENST00000580237 SLC5A9Q2M3M2 681 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF699Q32M78 642 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
NDEL1-208ENST00000580237 CENPPQ6IPU0 288 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 HFE2Q6ZVN8 426 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 ITIH5Q86UX2 942 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 TTC9BQ8N6N2 239 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 ST13P5Q8NFI4 369 aaPredicted RBP11.69□□□□□ -0.54
NDEL1-208ENST00000580237 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 RSAD2Q8WXG1 361 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 NXPE3Q969Y0 559 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
NDEL1-208ENST00000580237 BORCS6Q96GS4 357 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms