RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 SH3KBP1Q96B97 665 aa15.91■□□□□ 0.14
ITGB4-206ENST00000579662 CENPKQ9BS16 269 aa15.91■□□□□ 0.14
ITGB4-206ENST00000579662 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-206ENST00000579662 PDAP1Q13442 181 aaKnown RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 DDIASQ8IXT1 998 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 PPIL6Q8IXY8 311 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 PTPRN2Q92932 1015 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 ZSWIM1Q9BR11 485 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 COLEC11Q9BWP8 271 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 MRPL46Q9H2W6 279 aaKnown RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 ARL2BPQ9Y2Y0 163 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 CST8O60676 142 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 KPNA6O60684 536 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 E2F6O75461 281 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 PPP1R37O75864 691 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 POLBP06746 335 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 SPRP35270 261 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 CXCL9Q07325 125 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 UBE2Q2LH0YL09 131 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 COILP38432 576 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 AARSP49588 968 aaKnown RBP eCLIP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 MGAT5BQ3V5L5 792 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 TTC30AQ86WT1 665 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 SYTL5Q8TDW5 730 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 TEX12Q9BXU0 123 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 ASPSCR1Q9BZE9 553 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 CD44P16070 742 aaKnown RBP15.9■□□□□ 0.14
ITGB4-206ENST00000579662 EPHX2P34913 555 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 IL31Q6EBC2 164 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 GJB7Q6PEY0 223 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 AGAP3Q96P47 875 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 OLFML3Q9NRN5 406 aa15.9■□□□□ 0.14
ITGB4-206ENST00000579662 RSPH10B2B2RC85 870 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 H7C4K7 107 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.14
ITGB4-206ENST00000579662 RSPH10BP0C881 870 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 RNF217Q8TC41 542 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 FAM163AQ96GL9 167 aaPredicted RBP15.89■□□□□ 0.14
ITGB4-206ENST00000579662 PDCD2LQ9BRP1 358 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 MUC3BQ9H195 1237 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 NAGPAQ9UK23 515 aa15.89■□□□□ 0.14
ITGB4-206ENST00000579662 TLR2O60603 784 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 GRAP2O75791 330 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 GFAPP14136 432 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ATICP31939 592 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 DSG3P32926 999 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HARS2P49590 506 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 NAPEPLDQ6IQ20 393 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 METTL7BQ6UX53 244 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HIPK4Q8NE63 616 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 PIP4K2CQ8TBX8 421 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 PABPC5Q96DU9 382 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 EPN3Q9H201 632 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 GTPBP10A4D1E9 387 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HOXA2O43364 376 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 MCF2P10911 925 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 FDFT1P37268 417 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 MAGEA4P43358 317 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ABCE1P61221 599 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 NAA30Q147X3 362 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ZNF720Q7Z2F6 126 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 LINC00523Q86TU6 105 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 IDI2Q9BXS1 227 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 KDM4CQ9H3R0 1056 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 SH3BP1Q9Y3L3 701 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HIST1H2AGP0C0S8 130 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 KCNA2P16389 499 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HIST1H2ADP20671 130 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 TDRD10Q5VZ19 366 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 LRRC43Q8N309 656 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ATP6V0D2Q8N8Y2 350 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HIST1H2AHQ96KK5 128 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 MYCBPQ99417 103 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 HIST1H2AJQ99878 128 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 H2AFJQ9BTM1 129 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ETNK1Q9HBU6 452 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 FAM47DPA6NHR8 397 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 TGFB3P10600 412 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 GZMAP12544 262 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 STIP1P31948 543 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 CENPPQ6IPU0 288 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 SLC13A5Q86YT5 568 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 TBC1D19Q8N5T2 526 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 USP33Q8TEY7 942 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 PRMT1Q99873 361 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 THAP2Q9H0W7 228 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 AAASQ9NRG9 546 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 ADA2Q9NZK5 511 aa15.89■□□□□ 0.13
ITGB4-206ENST00000579662 AFF4Q9UHB7 1163 aaKnown RBP15.89■□□□□ 0.13
ITGB4-206ENST00000579662 SLC30A1Q9Y6M5 507 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms