RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 OGTO15294 1046 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 FAM189A1O60320 539 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 GDF9O60383 454 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 SOAT2O75908 522 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 ADRB2P07550 413 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 ODC1P11926 461 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 SCP2P22307 547 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 CDC25CP30307 473 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 TNFSF9P41273 254 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 TUFMP49411 452 aaKnown RBP9.28□□□□□ -0.92
CASC3-206ENST00000579238 LIG4P49917 911 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 LIMK1P53667 647 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 NCKAP1LP55160 1127 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 CACNB1Q02641 598 aaPredicted RBP9.28□□□□□ -0.92
CASC3-206ENST00000579238 VEPH1Q14D04 833 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 PTPAQ15257 358 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 ENOX2Q16206 610 aaKnown RBP9.28□□□□□ -0.92
CASC3-206ENST00000579238 ITPRIPL2Q3MIP1 535 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 SPATA1Q5VX52 437 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 IL31Q6EBC2 164 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 CD302Q8IX05 232 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 TTC8Q8TAM2 541 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 LOXL4Q96JB6 756 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 SENP8Q96LD8 212 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 GCNAQ96QF7 691 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 TMEM209Q96SK2 561 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 SH2B1Q9NRF2 756 aaPredicted RBP9.28□□□□□ -0.92
CASC3-206ENST00000579238 THG1LQ9NWX6 298 aaKnown RBP9.28□□□□□ -0.92
CASC3-206ENST00000579238 ZMYM5Q9UJ78 669 aa9.28□□□□□ -0.92
CASC3-206ENST00000579238 RALGAPA1Q6GYQ0 2036 aa9.27□□□□□ -0.92
CASC3-206ENST00000579238 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 PPEF2O14830 753 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.93
CASC3-206ENST00000579238 PRAMEF12O95522 483 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 PIGRP01833 764 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 CYP11A1P05108 521 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 PLA2G4BP0C869 781 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 MCM2P49736 904 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 CYP4F8P98187 520 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 ATP2C1P98194 919 aaPredicted RBP9.27□□□□□ -0.93
CASC3-206ENST00000579238 TNK2Q07912 1038 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 AASDHQ4L235 1098 aaPredicted RBP9.27□□□□□ -0.93
CASC3-206ENST00000579238 C9orf57Q5W0N0 161 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 JADE1Q6IE81 842 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 CACNA2D4Q7Z3S7 1137 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 C12orf50Q8NA57 414 aaPredicted RBP9.27□□□□□ -0.93
CASC3-206ENST00000579238 OR10T2Q8NGX3 314 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 GAB3Q8WWW8 586 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 CDK5RAP3Q96JB5 506 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 CHAMP1Q96JM3 812 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 PLIN2Q99541 437 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
CASC3-206ENST00000579238 LPIN3Q9BQK8 851 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 ZCWPW1Q9H0M4 648 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 DSEQ9UL01 958 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 ODF2LQ9ULJ1 636 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 TBX20Q9UMR3 447 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 DERAQ9Y315 318 aa9.27□□□□□ -0.93
CASC3-206ENST00000579238 NUP210Q8TEM1 1887 aaPredicted RBP9.26□□□□□ -0.93
CASC3-206ENST00000579238 A0A0B4J269 797 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ANO9A1A5B4 782 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 PIRO00625 290 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 TM4SF5O14894 197 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 AXIN1O15169 862 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 SLC26A4O43511 780 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 EXTL3O43909 919 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ATG13O75143 517 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
CASC3-206ENST00000579238 AKAP3O75969 853 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 EPN2O95208 641 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ZNF806P0C7X5 589 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ATF6P18850 670 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 HOXC13P31276 330 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 RAP1GAPP47736 663 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 GRSF1Q12849 480 aaKnown RBP eCLIP9.26□□□□□ -0.93
CASC3-206ENST00000579238 TMEM132DQ14C87 1099 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 TAF12Q16514 161 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 TMEM119Q4V9L6 283 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 SLC39A12Q504Y0 691 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 RILPL1Q5EBL4 403 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ARSHQ5FYA8 562 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 CMTM8Q8IZV2 173 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 SPPL2BQ8TCT7 592 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 C2orf15Q8WU43 125 aaKnown RBP9.26□□□□□ -0.93
CASC3-206ENST00000579238 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 FAM83CQ9BQN1 747 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 MSTO1Q9BUK6 570 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 SLC46A2Q9BY10 475 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 ARRDC1-AS1Q9H2J1 176 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms