RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 TMEM39AQ9NV64 488 aa16.78■□□□□ 0.28
MSI2-206ENST00000579180 TMEM161AQ9NX61 479 aa16.78■□□□□ 0.28
MSI2-206ENST00000579180 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
MSI2-206ENST00000579180 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
MSI2-206ENST00000579180 NCANO14594 1321 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 A0A0A6YYK5 440 aaPredicted RBP16.77■□□□□ 0.27
MSI2-206ENST00000579180 PODXLO00592 558 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 TACC1O75410 805 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 MOCS3O95396 460 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 UPP1Q16831 310 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 CYFIP2Q96F07 1278 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 THAP2Q9H0W7 228 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.27
MSI2-206ENST00000579180 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 INPP5FQ9Y2H2 1132 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 CAPN6Q9Y6Q1 641 aa16.77■□□□□ 0.27
MSI2-206ENST00000579180 CASQ1P31415 396 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 CENPCQ03188 943 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 ORC1Q13415 861 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 TUSC3Q13454 348 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 CRIPAKQ8N1N5 446 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 C3orf58Q8NDZ4 430 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 KBTBD7Q8WVZ9 684 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 VWCEQ96DN2 955 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 PAAF1Q9BRP4 392 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 NT5C1AQ9BXI3 368 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 LTBP2Q14767 1821 aa16.76■□□□□ 0.27
MSI2-206ENST00000579180 FNDC1Q4ZHG4 1894 aaPredicted RBP16.75■□□□□ 0.27
MSI2-206ENST00000579180 TSC2P49815 1807 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.75■□□□□ 0.27
MSI2-206ENST00000579180 FAM170AA1A519 330 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 CASTOR2A6NHX0 329 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 BUB1O43683 1085 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 FGFR1P11362 822 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 ABCB4P21439 1286 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 SSTR3P32745 418 aaPredicted RBP16.75■□□□□ 0.27
MSI2-206ENST00000579180 NOMO3P69849 1222 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 TCEAL1Q15170 157 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 DPH6Q7L8W6 267 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 UNC93AQ86WB7 457 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 TOP6BLQ8N6T0 577 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 CTNNBL1Q8WYA6 563 aaPredicted RBP16.75■□□□□ 0.27
MSI2-206ENST00000579180 ARHGEF26Q96DR7 871 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
MSI2-206ENST00000579180 NOX5Q96PH1 765 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 KIAA1257Q9ULG3 409 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
MSI2-206ENST00000579180 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 VDRP11473 427 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 CD19P15391 556 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 CDH5P33151 784 aaPredicted RBP16.74■□□□□ 0.27
MSI2-206ENST00000579180 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.278e-6■■■■■ 52.4
MSI2-206ENST00000579180 GPC5P78333 572 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 PASD1Q8IV76 773 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 APPL2Q8NEU8 664 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 TRIM58Q8NG06 486 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 UROC1Q96N76 676 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 PCDHB7Q9Y5E2 793 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 ALPK3Q96L96 1907 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 CYB561D2O14569 222 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 MED7O43513 233 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 HUS1O60921 280 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 LSM8O95777 96 aaKnown RBP16.74■□□□□ 0.27
MSI2-206ENST00000579180 WARSP23381 471 aaKnown RBP16.74■□□□□ 0.27
MSI2-206ENST00000579180 RFC2P35250 354 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 DSC1Q08554 894 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 DEFB128Q7Z7B8 93 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 PHF13Q86YI8 300 aaPredicted RBP16.74■□□□□ 0.27
MSI2-206ENST00000579180 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 SLC35G2Q8TBE7 412 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 URGCPQ8TCY9 931 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 RFFLQ8WZ73 363 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 HEXIM2Q96MH2 286 aaKnown RBP16.74■□□□□ 0.27
MSI2-206ENST00000579180 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
MSI2-206ENST00000579180 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 B4GALT3O60512 393 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 DDHD2O94830 711 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 CYP1A2P05177 515 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 ITGB8P26012 769 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 GNL1P36915 607 aaPredicted RBP16.73■□□□□ 0.27
MSI2-206ENST00000579180 NSFP46459 744 aaKnown RBP16.73■□□□□ 0.27
MSI2-206ENST00000579180 NAP1L1P55209 391 aaKnown RBP16.73■□□□□ 0.27
MSI2-206ENST00000579180 CNGA2Q16280 664 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 SGO2Q562F6 1265 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 PPP1R2P3Q6NXS1 205 aa16.73■□□□□ 0.27
MSI2-206ENST00000579180 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms