RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 RPF1Q9H9Y2 349 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-212ENST00000579175 COL4A2P08572 1712 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TTC26A0AVF1 554 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 H0YCG3 227 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 LAD1O00515 517 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 VNN2O95498 520 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CCDC192P0DO97 292 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MAPTP10636 758 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ODC1P11926 461 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CYP3A5P20815 502 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GUCY2CP25092 1073 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TNFSF9P41273 254 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PXNP49023 591 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CYP4F8P98187 520 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TNK2Q07912 1038 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MGAT5BQ3V5L5 792 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GAREM2Q75VX8 874 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 WDR5BQ86VZ2 330 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TTC9BQ8N6N2 239 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PSMG2Q969U7 264 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SENP8Q96LD8 212 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TMEM209Q96SK2 561 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 C2orf42Q9NWW7 574 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 LARSQ9P2J5 1176 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SLC8A2Q9UPR5 921 aa13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MYH11P35749 1972 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 NPHP3-ACAD11A0A0J9YXS1 232 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 EXTL3O43909 919 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TYMPP19971 482 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 HOXC13P31276 330 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CUL4AQ13619 759 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SF3A2Q15428 464 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 KYAT1Q16773 422 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 METTL23Q86XA0 190 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SYNPOQ8N3V7 929 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 OBP2AQ9NY56 170 aa13.67□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PPEF2O14830 753 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 HNRNPDLO14979 420 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ATG13O75143 517 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 RPP40O75818 363 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PRAMEF12O95522 483 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.226e-7■■■□□ 18.2
CDK5RAP3-212ENST00000579175 CDC25CP30307 473 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 PRPHP41219 470 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 LILRA4P59901 499 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ZBTB6Q15916 424 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 IL17AQ16552 155 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 JADE1Q6IE81 842 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 THEM5Q8N1Q8 247 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 SYT2Q8N9I0 419 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 INTS4Q96HW7 963 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 HAPLN2Q9GZV7 340 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ZHX3Q9H4I2 956 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ANGPTL2Q9UKU9 493 aa13.66□□□□□ -0.22
CDK5RAP3-212ENST00000579175 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 K7ENM7 598 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 OGTO15294 1046 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 HOXA6P31267 233 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 AVPR1AP37288 418 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 BFSP1Q12934 665 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CCINQ13939 588 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 ENOX2Q16206 610 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 CD302Q8IX05 232 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 GAB3Q8WWW8 586 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MKNK1Q9BUB5 465 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MSTO1Q9BUK6 570 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 KCND2Q9NZV8 630 aa13.65□□□□□ -0.22
CDK5RAP3-212ENST00000579175 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-212ENST00000579175 FAM13AO94988 1023 aa13.64□□□□□ -0.23
CDK5RAP3-212ENST00000579175 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms