RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RBAKQ9NYW8 714 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DSEQ9UL01 958 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MTMR6Q9Y217 621 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PCDHB13Q9Y5F0 798 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 STYXL1Q9Y6J8 313 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PIAS3Q9Y6X2 628 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NOTCH4Q99466 2003 aa9.95□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZFHX2Q9C0A1 2572 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NCANO14594 1321 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 A0A087X0B3 334 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 KPNA7A9QM74 516 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MAN2B1O00754 1011 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 KINO60870 393 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PPP1R37O75864 691 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PRPF6O94906 941 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ITGB3P05106 788 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CYP11A1P05108 521 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 KRT19P08727 400 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 POLR2BP30876 1174 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MAGEA9P43362 315 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 EPHA5P54756 1037 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CYP4F8P98187 520 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SLC39A14Q15043 492 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FOXD4L6Q3SYB3 417 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ARHGAP15Q53QZ3 475 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GPR158Q5T848 1215 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 WSCD1Q658N2 575 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TSSK4Q6SA08 328 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FOXD4L3Q6VB84 417 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DNAJB7Q7Z6W7 309 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MAML2Q8IZL2 1156 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZSWIM2Q8NEG5 633 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TTC8Q8TAM2 541 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FAM3CQ92520 227 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PSMG2Q969U7 264 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DNAJC19Q96DA6 116 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NELL2Q99435 816 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FGFBP2Q9BYJ0 223 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 OSBPL6Q9BZF3 934 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZCWPW1Q9H0M4 648 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SEMA4AQ9H3S1 761 aa9.94□□□□□ -0.82
CDK5RAP3-211ENST00000578996 VPS13AQ96RL7 3174 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SLC38A8A6NNN8 435 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FGF19O95750 216 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LDHAP00338 332 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HSP90AA1P07900 732 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TMEM191BP0C7N4 346 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ATF6P18850 670 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CCNE1P24864 410 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TUFMP49411 452 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 KPNA1P52294 538 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 WNT7BP56706 349 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 BFSP1Q12934 665 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ALCAMQ13740 583 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GAREM2Q75VX8 874 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ARID3BQ8IVW6 561 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MFSD6LQ8IWD5 586 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 BRSK2Q8IWQ3 736 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CCDC65Q8IXS2 484 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 KIAA2013Q8IYS2 634 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DCP1BQ8IZD4 617 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ATRIPQ8WXE1 791 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HPS3Q969F9 1004 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 E2F7Q96AV8 911 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FAM84AQ96KN4 292 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CBWD1Q9BRT8 395 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 STRA6Q9BX79 667 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 BACH2Q9BYV9 841 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TMEM206Q9H813 350 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 OLFML3Q9NRN5 406 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FBXO4Q9UKT5 387 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MAGED2Q9UNF1 606 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 AGAP1Q9UPQ3 857 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ASB3Q9Y575 518 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TSC2P49815 1807 aa9.93□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CFAP54Q96N23 3096 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MIA3Q5JRA6 1907 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SPTLC2O15270 562 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HUS1O60921 280 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GARTP22102 1010 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PNPLA4P41247 253 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RPS9P46781 194 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ID4P47928 161 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SOX9P48436 509 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TSPY1Q01534 308 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 POU5F1Q01860 360 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MTAPQ13126 283 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LRRTM3Q86VH5 581 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NT5DC4Q86YG4 428 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GPD1LQ8N335 351 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms