RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 STXBP4Q6ZWJ1 553 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 ASCL5Q7RTU5 278 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 DNAJB7Q7Z6W7 309 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 TMC8Q8IU68 726 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 C1orf210Q8IVY1 113 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 TTC9BQ8N6N2 239 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 SHKBP1Q8TBC3 707 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 ZSCAN18Q8TBC5 510 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 DHX58Q96C10 678 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF560Q96MR9 790 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 BRD9Q9H8M2 597 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 AGAP1Q9UPQ3 857 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 TCHHQ07283 1943 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 A0A1W2PRU2 124 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 SOAT2O75908 522 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 PSMC3P17980 439 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 VIPR2P41587 438 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 ITIH5Q86UX2 942 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 DNASE1L2Q92874 299 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 NKD2Q969F2 451 aaPredicted RBP17.13■□□□□ 0.33
CRLF3-203ENST00000578692 HPS3Q969F9 1004 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 PSMG2Q969U7 264 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 NELL2Q99435 816 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 TRIM9Q9C026 710 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 TRPV4Q9HBA0 871 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
CRLF3-203ENST00000578692 PRR23AA6NEV1 266 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
CRLF3-203ENST00000578692 F13A1P00488 732 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 ITGB3P05106 788 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
CRLF3-203ENST00000578692 CDR1P51861 262 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 MGAT5BQ3V5L5 792 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 VITQ6UXI7 678 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 TPRG1Q6ZUI0 275 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 MFSD6LQ8IWD5 586 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
CRLF3-203ENST00000578692 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 FAM200AQ8TCP9 573 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 C2orf15Q8WU43 125 aaKnown RBP17.12■□□□□ 0.33
CRLF3-203ENST00000578692 IRF7Q92985 503 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 E2F7Q96AV8 911 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 SEPT5Q99719 369 aaPredicted RBP17.12■□□□□ 0.33
CRLF3-203ENST00000578692 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 PDE11AQ9HCR9 933 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 COL4A3Q01955 1670 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 TSC2P49815 1807 aa17.12■□□□□ 0.33
CRLF3-203ENST00000578692 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 NCAM2O15394 837 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 FGF19O95750 216 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 GDI1P31150 447 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 ASIC1P78348 528 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 GAREM2Q75VX8 874 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 SPPL2BQ8TCT7 592 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 ATXN3LQ9H3M9 355 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF334Q9HCZ1 680 aaPredicted RBP17.11■□□□□ 0.33
CRLF3-203ENST00000578692 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
CRLF3-203ENST00000578692 MIA3Q5JRA6 1907 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF263O14978 683 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
CRLF3-203ENST00000578692 HUS1O60921 280 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 KRT19P08727 400 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 TMEM191BP0C7N4 346 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 GABRR2P28476 465 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 HOXD13P35453 343 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 RBP5P82980 135 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 VEPH1Q14D04 833 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 SCARA3Q6AZY7 606 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 ATL3Q6DD88 541 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 ZNF507Q8TCN5 953 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 LPIN3Q9BQK8 851 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
CRLF3-203ENST00000578692 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
CRLF3-203ENST00000578692 EIF3DO15371 548 aaKnown RBP eCLIP17.09■□□□□ 0.33
CRLF3-203ENST00000578692 SP9P0CG40 484 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms