RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 UPF3AQ9H1J1 476 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CHST12Q9NRB3 414 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 DDX56Q9NY93 547 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 MCM3APO60318 1980 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 NDC80O14777 642 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 CILPO75339 1184 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 IGHA2P01877 340 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 PAX3P23760 479 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 PEX5P50542 639 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 LMNB2Q03252 620 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 MAMLD1Q13495 774 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 ACAP1Q15027 740 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 SNX17Q15036 470 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 LRRC38Q5VT99 294 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 MMS22LQ6ZRQ5 1243 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 SYDE1Q6ZW31 735 aaPredicted RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 CD101Q93033 1021 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 C18orf8Q96DM3 657 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 RBM41Q96IZ5 413 aaKnown RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 SNX27Q96L92 541 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 AP1M1Q9BXS5 423 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 GOLPH3Q9H4A6 298 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 SNTG2Q9NY99 539 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 HESX1Q9UBX0 185 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 PIN4Q9Y237 131 aaKnown RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
SKA2-204ENST00000578519 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
SKA2-204ENST00000578519 GPR182O15218 404 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 TREHO43280 583 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 RAD51CO43502 376 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 PHF2O75151 1096 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 GNRH1P01148 92 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SKIP12755 728 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 CYBAP13498 195 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 KCNE1P15382 129 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 SSR1P43307 286 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 FNTAP49354 379 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 RAD23BP54727 409 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 DRG2P55039 364 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 COPS2P61201 443 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 MRPS6P82932 125 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 BEX3Q00994 111 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SLC7A5Q01650 507 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 DR1Q01658 176 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SP3Q02447 781 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 INCA1Q0VD86 236 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
SKA2-204ENST00000578519 SV2CQ496J9 727 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 ZNF394Q53GI3 561 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
SKA2-204ENST00000578519 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SLC13A5Q86YT5 568 aaPredicted RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 RCOR2Q8IZ40 523 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 C3orf20Q8ND61 904 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 EXD1Q8NHP7 514 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 AENQ8WTP8 325 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 MAGOHBQ96A72 148 aaKnown RBP11.79□□□□□ -0.52
SKA2-204ENST00000578519 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SLC38A7Q9NVC3 462 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 SMARCAL1Q9NZC9 954 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 POLIQ9UNA4 740 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 MYH10P35580 1976 aa11.79□□□□□ -0.52
SKA2-204ENST00000578519 TMEM191CA6NGB0 347 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 FSCN2O14926 492 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 ADCY6O43306 1168 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
SKA2-204ENST00000578519 KRT7P08729 469 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 HOXC8P31273 242 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 RDXP35241 583 aaKnown RBP11.78□□□□□ -0.52
SKA2-204ENST00000578519 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 FLT3LGP49771 235 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 TMEM62Q0P6H9 643 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 PTPROQ16827 1216 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms